RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 NOP53Q9NZM5 478 aaKnown RBP22.56■■□□□ 1.2
SIPA1-210ENST00000534406 TRBV11-1A0A0K0K1C0 115 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 PRPS2P11908 318 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 PORP16435 677 aaPredicted RBP22.55■■□□□ 1.2
SIPA1-210ENST00000534406 FEN1P39748 380 aaKnown RBP22.55■■□□□ 1.2
SIPA1-210ENST00000534406 CLCN2P51788 898 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 EMX2Q04743 252 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 SPRED3Q2MJR0 410 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF750Q32MQ0 723 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 DGAT2L6Q6ZPD8 337 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 TICAM1Q8IUC6 712 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 LRRC25Q8N386 305 aaPredicted RBP22.55■■□□□ 1.2
SIPA1-210ENST00000534406 KIF2BQ8N4N8 673 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 PSMF1Q92530 271 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 RIT1Q92963 219 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 FBXL20Q96IG2 436 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 CNPPD1Q9BV87 410 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 SLC25A18Q9H1K4 315 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 SLC35C2Q9NQQ7 365 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 PTGFRNQ9P2B2 879 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 COPS7AQ9UBW8 275 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 BAIAP2L1Q9UHR4 511 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 CPAMD8Q8IZJ3 1885 aa22.55■■□□□ 1.2
SIPA1-210ENST00000534406 DDAH2O95865 285 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 PDGFAP04085 211 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 LBPP18428 481 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 NT5EP21589 574 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 SOX11P35716 441 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 HPCAL1P37235 193 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 ISLR2Q6UXK2 745 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 FAM47EQ6ZV65 393 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 ASB18Q6ZVZ8 466 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 GALNT12Q8IXK2 581 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 SLC5A8Q8N695 610 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 OR1N1Q8NGS0 311 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 GFM2Q969S9 779 aaKnown RBP22.54■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF764Q96H86 408 aaPredicted RBP22.54■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF681Q96N22 645 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 REEP4Q9H6H4 257 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 CXorf21Q9HAI6 301 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF71Q9NQZ8 489 aaPredicted RBP22.54■■□□□ 1.2
SIPA1-210ENST00000534406 TEKT2Q9UIF3 430 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 EXO1Q9UQ84 846 aaKnown RBP22.54■■□□□ 1.2
SIPA1-210ENST00000534406 CNTRLQ7Z7A1 2325 aa22.54■■□□□ 1.2
SIPA1-210ENST00000534406 K7EM74 188 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 AKAP10O43572 662 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 LRATO95237 230 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 ATP1B1P05026 303 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 GPR143P51810 404 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 H3F3CQ6NXT2 135 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 FAM180BQ6P0A1 224 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 MAVSQ7Z434 540 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 HPS6Q86YV9 775 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 SLC39A7Q92504 469 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 TM9SF4Q92544 642 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 SEMA4CQ9C0C4 833 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 EPS8L2Q9H6S3 715 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 TAS2R7Q9NYW3 318 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF223Q9UK11 482 aaPredicted RBP22.53■■□□□ 1.2
SIPA1-210ENST00000534406 ERVK-19Q9WJR5 959 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 USH1CQ9Y6N9 552 aa22.53■■□□□ 1.2
SIPA1-210ENST00000534406 GOLGA8QA0A0J9YX86 632 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 GOLGA8OA6NCC3 632 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 A8MUI8 341 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 GOLGA8NF8WBI6 632 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 DDX5P17844 614 aaKnown RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 NTSP30990 170 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 DUSP2Q05923 314 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 MFAP5Q13361 173 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 ZNF267Q14586 743 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 PTGR1Q14914 329 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 B3GNTL1Q67FW5 361 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 OGFOD2Q6N063 350 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 LINC00696Q6ZRV3 163 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 LARP4Q71RC2 724 aaKnown RBP eCLIP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 LGI4Q8N135 537 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 PPCDCQ96CD2 204 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 SENP5Q96HI0 755 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 BBC3Q96PG8 261 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 BBS4Q96RK4 519 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 DEFB126Q9BYW3 111 aa22.52■■□□□ 1.2
SIPA1-210ENST00000534406 WDR55Q9H6Y2 383 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.52■■□□□ 1.2
SIPA1-210ENST00000534406 SCAMP2O15127 329 aaKnown RBP22.51■■□□□ 1.19
SIPA1-210ENST00000534406 TBX19O60806 448 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 IGKV3-11P04433 115 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 G6PDP11413 515 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 EPHA3P29320 983 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 RPL3P39023 403 aaKnown RBP22.51■■□□□ 1.19
SIPA1-210ENST00000534406 PDE7AQ13946 482 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 CEBPEQ15744 281 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 ABHD17BQ5VST6 288 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 FCRLBQ6BAA4 426 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 HSDL2Q6YN16 418 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 R3HCC1LQ7Z5L2 792 aaKnown RBP22.51■■□□□ 1.19
SIPA1-210ENST00000534406 VWA5B2Q8N398 1253 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 ZNF321PQ8N8H1 164 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 DOK4Q8TEW6 326 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 ZNF721Q8TF20 911 aa22.51■■□□□ 1.19
SIPA1-210ENST00000534406 MTERF3Q96E29 417 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms