RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 KIAA0040Q15053 153 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 ACSM2BQ68CK6 577 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 SPINK14Q6IE38 97 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 MMP21Q8N119 569 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 HORMAD2Q8N7B1 307 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 SUN3Q8TAQ9 357 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 ZNF681Q96N22 645 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 HEY2Q9UBP5 337 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 VPS4AQ9UN37 437 aa19.82■□□□□ 0.76
PKP3-211ENST00000534401 PCDH7O60245 1069 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 ERLIN1O75477 346 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 SP1P08047 785 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 CPMP14384 443 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 S1PR1P21453 382 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 TDGF1P3P51864 188 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 SLC37A1P57057 533 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 MGAT2Q10469 447 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 MPP2Q14168 576 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 MPEG1Q2M385 716 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 ARL13AQ5H913 290 aaPredicted RBP19.81■□□□□ 0.76
PKP3-211ENST00000534401 KANK2Q63ZY3 851 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 SLC25A25Q6KCM7 469 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 Q6ZSR9 355 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 C9orf40Q8IXQ3 194 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 GPALPP1Q8IXQ4 340 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 BCORP1Q8N888 145 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 ST6GALNAC3Q8NDV1 305 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 OR5L2Q8NGL0 311 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 C16orf78Q8WTQ4 265 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 THAP3Q8WTV1 239 aaPredicted RBP19.81■□□□□ 0.76
PKP3-211ENST00000534401 RIT1Q92963 219 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 FCRL1Q96LA6 429 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 TUBB1Q9H4B7 451 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 ANKRD10Q9NXR5 420 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 DLGAP4Q9Y2H0 992 aa19.81■□□□□ 0.76
PKP3-211ENST00000534401 WBP11Q9Y2W2 641 aaKnown RBP19.81■□□□□ 0.76
PKP3-211ENST00000534401 TM9SF1O15321 606 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 DYRK3O43781 588 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 NME2P1O60361 137 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 ZNF354AO60765 605 aaPredicted RBP19.8■□□□□ 0.76
PKP3-211ENST00000534401 ATP1B1P05026 303 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 CHRNGP07510 517 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 CD46P15529 392 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 PORP16435 677 aaPredicted RBP19.8■□□□□ 0.76
PKP3-211ENST00000534401 NME2P22392 152 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 GNLYP22749 145 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 UQCRFS1P47985 274 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 ST13P50502 369 aaKnown RBP19.8■□□□□ 0.76
PKP3-211ENST00000534401 CEBPEQ15744 281 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 PIGGQ5H8A4 983 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 CLEC6AQ6EIG7 209 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 C16orf47Q6ZP98 133 aaPredicted RBP19.8■□□□□ 0.76
PKP3-211ENST00000534401 NR4A3Q92570 626 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 CTHRC1Q96CG8 243 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 RASL10BQ96S79 203 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 FAIM2Q9BWQ8 316 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 HES7Q9BYE0 225 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 SHCBP1LQ9BZQ2 653 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 RRAGDQ9NQL2 400 aaPredicted RBP19.8■□□□□ 0.76
PKP3-211ENST00000534401 EHD3Q9NZN3 535 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 COPS7AQ9UBW8 275 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 ZNF639Q9UID6 485 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 PSME2Q9UL46 239 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 DNAJC15Q9Y5T4 150 aa19.8■□□□□ 0.76
PKP3-211ENST00000534401 EML6Q6ZMW3 1958 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 OR6C76A6NM76 312 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 BIRC5O15392 142 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 OR10H2O60403 315 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 OR2J2O76002 312 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 RASAL1O95294 804 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 CT62P0C5K7 136 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 EDN3P14138 238 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 SERPINB4P48594 390 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 SSR4P51571 173 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ERVK-8P63133 956 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 OC90Q02509 493 aaPredicted RBP19.79■□□□□ 0.76
PKP3-211ENST00000534401 MAP4K2Q12851 820 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ZNF267Q14586 743 aaPredicted RBP19.79■□□□□ 0.76
PKP3-211ENST00000534401 NR6A1Q15406 480 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ZNF750Q32MQ0 723 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 CES4AQ5XG92 561 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 FAM180AQ6UWF9 173 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 CLYBLQ8N0X4 340 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ZNF615Q8N8J6 731 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ZNF441Q8N8Z8 693 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 TMEM178AQ8NBL3 297 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 CNRIP1Q96F85 164 aaPredicted RBP19.79■□□□□ 0.76
PKP3-211ENST00000534401 LIN28AQ9H9Z2 209 aaKnown RBP19.79■□□□□ 0.76
PKP3-211ENST00000534401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.79■□□□□ 0.76
PKP3-211ENST00000534401 TAS2R7Q9NYW3 318 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 ERVK-19Q9WJR5 959 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 TRAF6Q9Y4K3 522 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 PTPN13Q12923 2485 aa19.79■□□□□ 0.76
PKP3-211ENST00000534401 SLC28A1O00337 649 aa19.78■□□□□ 0.76
PKP3-211ENST00000534401 SLC25A12O75746 678 aa19.78■□□□□ 0.76
PKP3-211ENST00000534401 NADKO95544 446 aaPredicted RBP19.78■□□□□ 0.76
PKP3-211ENST00000534401 CRYABP02511 175 aaKnown RBP19.78■□□□□ 0.76
PKP3-211ENST00000534401 IL3P08700 152 aa19.78■□□□□ 0.76
PKP3-211ENST00000534401 ANXA4P09525 319 aaPredicted RBP19.78■□□□□ 0.76
PKP3-211ENST00000534401 CSNK2A2P19784 350 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms