RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
CTSB-230ENST00000534149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.221e-8■■□□□ 11.8
CTSB-230ENST00000534149 IQANK1A0A1B0GTG1 560 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 MBD3L4A6NDZ8 208 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 MBD3L3A6NE82 208 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 MBD3L5A6NJ08 208 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 CD8B2A6NJW9 211 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 STK16O75716 305 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 GOSR1O95249 250 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 TGFB1P01137 390 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 ALOX15P16050 662 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 OPRM1P35372 400 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 GGT5P36269 586 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 CDK9P50750 372 aaKnown RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 CHIT1Q13231 466 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 ZNF267Q14586 743 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 PDK4Q16654 411 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 HIST2H2ACQ16777 129 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 PAGE2BQ5JRK9 111 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 VASNQ6EMK4 673 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 HIST2H2AA3Q6FI13 130 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 RNF111Q6ZNA4 994 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 CIARTQ8N365 385 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 TCAIMQ8N3R3 496 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 MBD3L2Q8NHZ7 208 aaPredicted RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 UBQLN3Q9H347 655 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
CTSB-230ENST00000534149 JKAMPQ9P055 326 aa13.67□□□□□ -0.22
CTSB-230ENST00000534149 EXPH5Q8NEV8 1989 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 CCNT2O60583 730 aaKnown RBP13.66□□□□□ -0.22
CTSB-230ENST00000534149 HPNP05981 417 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 PCNAP12004 261 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 BMP7P18075 431 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 EPORP19235 508 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 PCSK6P29122 969 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 SLC37A1P57057 533 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 FBXW4P57775 412 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 IRF8Q02556 426 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 SLAMF1Q13291 335 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 LAPTM5Q13571 262 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 SF3B4Q15427 424 aaKnown RBP eCLIP13.66□□□□□ -0.221e-7■■■□□ 16.8
CTSB-230ENST00000534149 TMEM35AQ53FP2 167 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 EIPR1Q53HC9 387 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 Q5PR19 223 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 FNDC7Q5VTL7 733 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
CTSB-230ENST00000534149 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 ANKMY2Q8IV38 441 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 PDIK1LQ8N165 341 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 C7orf57Q8NEG2 295 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 WDYHV1Q96HA8 205 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 COX4I2Q96KJ9 171 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 RILPQ96NA2 401 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 GNRHR2Q96P88 292 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 RBM24Q9BX46 236 aaKnown RBP13.66□□□□□ -0.22
CTSB-230ENST00000534149 UGT2B28Q9BY64 529 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 DERL2Q9GZP9 239 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 C15orf41Q9Y2V0 281 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 TEX264Q9Y6I9 313 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 ZANQ9Y493 2812 aa13.66□□□□□ -0.22
CTSB-230ENST00000534149 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 SH3D21A4FU49 640 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 ANKRD33BA6NCL7 494 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 H7C1Q1 480 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 TP53I11O14683 189 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 OR10H2O60403 315 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 IL18BPO95998 194 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 CLPSP04118 112 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 RPL21P46778 160 aaKnown RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 MASP1P48740 699 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 HNRNPH2P55795 449 aaKnown RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 MGAT5Q09328 741 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 RPS6KA2Q15349 733 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 TOMM20Q15388 145 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 OR4D1Q15615 310 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 WIPI1Q5MNZ9 446 aaPredicted RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 SULT1C3Q6IMI6 304 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 LUZP2Q86TE4 346 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 TAGAPQ8N103 731 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 RNF175Q8N4F7 328 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 TANKQ92844 425 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 EXT2Q93063 718 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
CTSB-230ENST00000534149 DACH2Q96NX9 599 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms