RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TRIM3O75382 744 aaPredicted RBP19.56■□□□□ 0.72
SSH3-211ENST00000534112 SEC31AO94979 1220 aaKnown RBP19.56■□□□□ 0.72
SSH3-211ENST00000534112 IL2RAP01589 272 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 RAF1P04049 648 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 EPXP11678 715 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 TACR1P25103 407 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 GDF1P27539 372 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 HERVK_113P63132 956 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 ERVK-8P63133 956 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 CRYZQ08257 329 aaKnown RBP19.56■□□□□ 0.72
SSH3-211ENST00000534112 ZNF267Q14586 743 aaPredicted RBP19.56■□□□□ 0.72
SSH3-211ENST00000534112 NTRK2Q16620 822 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 C18orf63Q68DL7 685 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 LRRC70Q7Z2Q7 622 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 GPR180Q86V85 440 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 KLHL7Q8IXQ5 586 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 ST13P4Q8IZP2 240 aaPredicted RBP19.56■□□□□ 0.72
SSH3-211ENST00000534112 ERVK-6Q9BXR3 956 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 ERVK-19Q9WJR5 959 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 MPDZO75970 2070 aa19.56■□□□□ 0.72
SSH3-211ENST00000534112 ANKRD33BA6NCL7 494 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 TUBAL3A6NHL2 446 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 PRKRAO75569 313 aaKnown RBP19.55■□□□□ 0.72
SSH3-211ENST00000534112 ATE1O95260 518 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 S100BP04271 92 aaPredicted RBP19.55■□□□□ 0.72
SSH3-211ENST00000534112 SERPINB1P30740 379 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 TLX1P31314 330 aaPredicted RBP19.55■□□□□ 0.72
SSH3-211ENST00000534112 ZNF136P52737 540 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 SLC37A1P57057 533 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 DR1Q01658 176 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 TNFRSF17Q02223 184 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 DEFB113Q30KQ7 82 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 FBXW10Q5XX13 1052 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 TMEM198Q66K66 360 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 RNF111Q6ZNA4 994 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 CAPN12Q6ZSI9 719 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 DIO2Q92813 273 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 RGMAQ96B86 450 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 ZNF597Q96LX8 424 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 RNF112Q9ULX5 631 aa19.55■□□□□ 0.72
SSH3-211ENST00000534112 WASHC1A8K0Z3 465 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 CXorf49A8MYA2 514 aaPredicted RBP19.54■□□□□ 0.72
SSH3-211ENST00000534112 OR10H2O60403 315 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 TRAPPC6AO75865 159 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 GPR75O95800 540 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 STMN1P16949 149 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 HNRNPH2P55795 449 aaKnown RBP19.54■□□□□ 0.72
SSH3-211ENST00000534112 PCDH1Q08174 1060 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 KEAP1Q14145 624 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 EBPQ15125 230 aaKnown RBP19.54■□□□□ 0.72
SSH3-211ENST00000534112 SPRED3Q2MJR0 410 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 TBCELQ5QJ74 424 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 TMEM64Q6YI46 380 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 KIF18BQ86Y91 864 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 PM20D2Q8IYS1 436 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 TAGAPQ8N103 731 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 RNF175Q8N4F7 328 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 WFDC11Q8NEX6 87 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 RIT1Q92963 219 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 EXT2Q93063 718 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 UBXN10Q96LJ8 280 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 PELOQ9BRX2 385 aaKnown RBP19.54■□□□□ 0.72
SSH3-211ENST00000534112 TRIM31Q9BZY9 425 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 PRDM14Q9GZV8 571 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 EPB41L4BQ9H329 900 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 PHF11Q9UIL8 331 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 NINQ8N4C6 2090 aa19.54■□□□□ 0.72
SSH3-211ENST00000534112 OR6C76A6NM76 312 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 ACSL3O95573 720 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 RAP1GDS1P52306 607 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 DDX39BQ13838 428 aaKnown RBP19.53■□□□□ 0.72
SSH3-211ENST00000534112 SF3B4Q15427 424 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSH3-211ENST00000534112 NSUN5P2Q63ZY6 315 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 BICRALQ6AI39 1079 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 VASNQ6EMK4 673 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 BIVMQ86UB2 503 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 ZCCHC7Q8N3Z6 543 aaKnown RBP19.53■□□□□ 0.72
SSH3-211ENST00000534112 HUS1BQ8NHY5 278 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 LINC01560Q8TB33 94 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 HSPBAP1Q96EW2 488 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 GPR22Q99680 433 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 UBQLN3Q9H347 655 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 PLEKHF2Q9H8W4 249 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 ADGRE2Q9UHX3 823 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 IKBKGQ9Y6K9 419 aa19.53■□□□□ 0.72
SSH3-211ENST00000534112 PLPP1O14494 284 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 TP53I11O14683 189 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 CLPSP04118 112 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 HPNP05981 417 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 TCP1P17987 556 aaKnown RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 BUD31P41223 144 aaPredicted RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 RPL21P46778 160 aaKnown RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 CDK9P50750 372 aaKnown RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 AGFG1P52594 562 aaKnown RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 FBXW4P57775 412 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 LTBQ06643 244 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 CBLBQ13191 982 aa19.52■□□□□ 0.72
SSH3-211ENST00000534112 ZKSCAN8Q15776 578 aaPredicted RBP19.52■□□□□ 0.72
SSH3-211ENST00000534112 ZNF441Q8N8Z8 693 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms