RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	GCNT2	Q8N0V5	402 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	KCNH5	Q8NCM2	988 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	OR8J1	Q8NGP2	316 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	OR10Q1	Q8NGQ4	319 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	GOLGA5	Q8TBA6	731 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	UBTD2	Q8WUN7	234 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	SLC38A5	Q8WUX1	472 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	NT5C3B	Q969T7	300 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	NCLN	Q969V3	563 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	LGALS12	Q96DT0	336 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	SLC41A3	Q96GZ6	507 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	FAM20A	Q96MK3	541 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	NDN	Q99608	321 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	GON7	Q9BXV9	100 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	LRRC2	Q9BYS8	371 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	GPR61	Q9BZJ8	451 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	C10orf88	Q9H8K7	445 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	COG4	Q9H9E3	785 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	C1RL	Q9NZP8	487 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	VPS54	Q9P1Q0	977 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.21	□□□□□ -1.74
ATM-223	ENST00000533979	FOXJ3	Q9UPW0	622 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	MRPS2	Q9Y399	296 aa	Known RBP	4.21	□□□□□ -1.74
ATM-223	ENST00000533979	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.21	□□□□□ -1.74
ATM-223	ENST00000533979	ABCC11	Q96J66	1382 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	NPC1L1	Q9UHC9	1359 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.21	□□□□□ -1.74
ATM-223	ENST00000533979	PLEKHG2	Q9H7P9	1386 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	GOLGA6L7	A0A1B0GV03	622 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979		A0A1W2PS18	150 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	PRR23A	A6NEV1	266 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF716	A6NP11	495 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	C15orf62	A8K5M9	175 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	EEF2K	O00418	725 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	PDXK	O00764	312 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	GAPDHS	O14556	408 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	PRRG1	O14668	218 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CHUK	O15111	745 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	MED7	O43513	233 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	DCX	O43602	365 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	BUD23	O43709	281 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CACNG3	O60359	315 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RNASEH1	O60930	286 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ECI2	O75521	394 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CIB2	O75838	187 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	OR4F21	O95013	312 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	SYNGR4	O95473	234 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RAF1	P04049	648 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	H1F0	P07305	194 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CA3	P07451	260 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	YES1	P07947	543 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CCDC172	P0C7W6	258 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF735	P0CB33	412 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ACP2	P11117	423 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	KRT3	P12035	628 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	FCAR	P24071	287 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ALDH4A1	P30038	563 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	SRD5A2	P31213	254 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CA8	P35219	290 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	MNDA	P41218	407 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	NR2C2	P49116	596 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	VAMP7	P51809	220 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	AIF1	P55008	147 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	HERV-K104	P63124	156 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RPP38	P78345	283 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CX3CL1	P78423	397 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	MECOM	Q03112	1051 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CCDC6	Q16204	474 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	AGK	Q53H12	422 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ARMCX4	Q5H9R4	360 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	SPDYC	Q5MJ68	293 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	C1orf185	Q5T7R7	199 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	TTC27	Q6P3X3	843 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	LRRC8B	Q6P9F7	803 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	BNIPL	Q7Z465	357 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	LONP2	Q86WA8	852 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	GBGT1	Q8N5D6	347 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	NOA1	Q8NC60	698 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	SPATA22	Q8NHS9	363 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	C17orf50	Q8WW18	174 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	IRGQ	Q8WZA9	623 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	GLYATL1	Q969I3	302 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	MCHR2	Q969V1	340 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	TMEM19	Q96HH6	336 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	PGLYRP2	Q96PD5	576 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	BTBD9	Q96Q07	612 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	JPH2	Q9BR39	696 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CBWD1	Q9BRT8	395 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	MMP28	Q9H239	520 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RIMS4	Q9H426	269 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	CALHM2	Q9HA72	323 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	NOX4	Q9NPH5	578 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF701	Q9NV72	531 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	TMEM30A	Q9NV96	361 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	HYPK	Q9NX55	129 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RAB20	Q9NX57	234 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	RDH8	Q9NYR8	311 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ZMAT5	Q9UDW3	170 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	POU2F3	Q9UKI9	436 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms