RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 ELL3Q9HB65 397 aaPredicted RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 CUEDC1Q9NWM3 386 aaPredicted RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 APOBEC3BQ9UH17 382 aaKnown RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 MGAT4BQ9UQ53 548 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 PCDHGA4Q9Y5G9 962 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 KIAA0513O60268 411 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 WBP4O75554 376 aaKnown RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 PEX11BO96011 259 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 CRHBPP24387 322 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 IL12BP29460 328 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 NDUFAF5Q5TEU4 345 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 NUP43Q8NFH3 380 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAD50-209ENST00000533482 RPL3LQ92901 407 aaKnown RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
RAD50-209ENST00000533482 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
RAD50-209ENST00000533482 RLN1P04808 185 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 PVRP15151 417 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 SELENOWP63302 87 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 TUBA1BP68363 451 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 HOXC5Q00444 222 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 CDK3Q00526 305 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 E2F2Q14209 437 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 TUBA1AQ71U36 451 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 GPR149Q86SP6 731 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 JAZF1Q86VZ6 243 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 PIGKQ92643 395 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 UBE2FQ969M7 185 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ARRDC3Q96B67 414 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 TMCO6Q96DC7 493 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 DGAT2Q96PD7 388 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 STARD5Q9NSY2 213 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ERVK13-1Q9NX77 482 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 MAFFQ9ULX9 164 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ENPP4Q9Y6X5 453 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 J3KTA2 159 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 K7ESM1 405 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 GPR37L1O60883 481 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 RPP14O95059 124 aaKnown RBP11.82□□□□□ -0.52
RAD50-209ENST00000533482 HMGN1P05114 100 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 PPP2R2BQ00005 443 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 EMX1Q04741 257 aaPredicted RBP11.82□□□□□ -0.52
RAD50-209ENST00000533482 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
RAD50-209ENST00000533482 SPHARQ15513 63 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ANKDD1AQ495B1 522 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 PHF19Q5T6S3 580 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 DPPA4Q7L190 304 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ASPGQ86U10 573 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 KLHL36Q8N4N3 616 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 NATD1Q8N6N6 113 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 OR4K5Q8NGD3 323 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 OR56A1Q8NGH5 318 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ECHDC3Q96DC8 303 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 SLC30A2Q9BRI3 323 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 SARDHQ9UL12 918 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 A0A1W2PPK0 400 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 EIF3FO00303 357 aaPredicted RBP11.82□□□□□ -0.52
RAD50-209ENST00000533482 XKRYO14609 159 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 DHFRP00374 187 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 RHCEP18577 417 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 CR2P20023 1033 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 GSTM3P21266 225 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 BCAP31P51572 246 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 CLCN2P51788 898 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 HDDC2Q7Z4H3 204 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 SLCO4A1Q96BD0 722 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
RAD50-209ENST00000533482 MND1Q9BWT6 205 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 GDE1Q9NZC3 331 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 ARFGEF1Q9Y6D6 1849 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 AHCTF1Q8WYP5 2266 aa11.82□□□□□ -0.52
RAD50-209ENST00000533482 FXYD1O00168 92 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 SEMA4FO95754 770 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 THEGLP0DJG4 465 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 GPR4P46093 362 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 CD83Q01151 205 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 ODF4Q2M2E3 257 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 AFMIDQ63HM1 303 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 C22orf42Q6IC83 251 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 CD300LGQ6UXG3 332 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 OAFQ86UD1 273 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 PHOSPHO1Q8TCT1 267 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 DMRT3Q9NQL9 472 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 COPS7AQ9UBW8 275 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 NOS1APO75052 506 aaPredicted RBP11.81□□□□□ -0.52
RAD50-209ENST00000533482 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 IGFALSP35858 605 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 OMPP47874 163 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 NANOGNBQ7Z5D8 188 aa11.81□□□□□ -0.52
RAD50-209ENST00000533482 OR52E4Q8NGH9 312 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms