RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ERVK-8P63133 956 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 TNFRSF17Q02223 184 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 KBTBD12Q3ZCT8 623 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 GRHL2Q6ISB3 625 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 LYPD8Q6UX82 237 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 CYS1Q717R9 158 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 WDR53Q7Z5U6 358 aaPredicted RBP21.05■□□□□ 0.96
PKP3-210ENST00000533249 TEX9Q8N6V9 391 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 HUS1BQ8NHY5 278 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 PAQR8Q8TEZ7 354 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 UBTD2Q8WUN7 234 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 TANKQ92844 425 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 MTERF1Q99551 399 aaKnown RBP21.05■□□□□ 0.96
PKP3-210ENST00000533249 CENPKQ9BS16 269 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 ERVK-6Q9BXR3 956 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 ZNF703Q9H7S9 590 aaPredicted RBP21.05■□□□□ 0.96
PKP3-210ENST00000533249 SH2D2AQ9NP31 389 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 ZDHHC18Q9NUE0 388 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 BOKQ9UMX3 212 aaPredicted RBP21.05■□□□□ 0.96
PKP3-210ENST00000533249 ERVK-19Q9WJR5 959 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 ANGPTL3Q9Y5C1 460 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 NCKAP5O14513 1909 aa21.05■□□□□ 0.96
PKP3-210ENST00000533249 UQCRHLA0A096LP55 91 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 PLPP1O14494 284 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 LRATO95237 230 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 LTA4HP09960 611 aaKnown RBP21.04■□□□□ 0.96
PKP3-210ENST00000533249 EPB42P16452 691 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 TLX1P31314 330 aaPredicted RBP21.04■□□□□ 0.96
PKP3-210ENST00000533249 ZNF267Q14586 743 aaPredicted RBP21.04■□□□□ 0.96
PKP3-210ENST00000533249 SLC29A4Q7RTT9 530 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 GSPT2Q8IYD1 628 aaKnown RBP21.04■□□□□ 0.96
PKP3-210ENST00000533249 SLC15A4Q8N697 577 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 JSRP1Q96MG2 331 aaPredicted RBP21.04■□□□□ 0.96
PKP3-210ENST00000533249 SLC6A15Q9H2J7 730 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 ZFP64Q9NPA5 681 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 DMRT3Q9NQL9 472 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 IGSF5Q9NSI5 407 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.04■□□□□ 0.96
PKP3-210ENST00000533249 ADGRE2Q9UHX3 823 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 L3MBTL1Q9Y468 752 aa21.04■□□□□ 0.96
PKP3-210ENST00000533249 IQANK1A0A1B0GTG1 560 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 WASHC1A8K0Z3 465 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 OR10H2O60403 315 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 GSTA2P09210 222 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 DNAJA1P31689 397 aaKnown RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 BUD31P41223 144 aaPredicted RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 TRPC1P48995 793 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 RPS13P62277 151 aaKnown RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 PCDH1Q08174 1060 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 BIKQ13323 160 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 SNTB1Q13884 538 aaKnown RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 RNF111Q6ZNA4 994 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 ST13P4Q8IZP2 240 aaPredicted RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 FBXW8Q8N3Y1 598 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 ZCCHC7Q8N3Z6 543 aaKnown RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 OR10G3Q8NGC4 313 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 NXNL1Q96CM4 212 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 ARGLU1Q9NWB6 273 aaPredicted RBP21.03■□□□□ 0.96
PKP3-210ENST00000533249 RAB21Q9UL25 225 aa21.03■□□□□ 0.96
PKP3-210ENST00000533249 NINQ8N4C6 2090 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 LRRC3CA6NJW4 275 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 GLOD5A6NK44 160 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 GABRA1P14867 456 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 CRABP2P29373 138 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 PIK3CBP42338 1070 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 TBL3Q12788 808 aaKnown RBP21.02■□□□□ 0.96
PKP3-210ENST00000533249 SLC25A35Q3KQZ1 300 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 RIPPLY2Q5TAB7 128 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 LIX1Q8N485 282 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 KCTD4Q8WVF5 259 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 WWTR1Q9GZV5 400 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 ACTR8Q9H981 624 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 PROK2Q9HC23 129 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 DNAJB12Q9NXW2 375 aaKnown RBP21.02■□□□□ 0.96
PKP3-210ENST00000533249 CNIH4Q9P003 139 aa21.02■□□□□ 0.96
PKP3-210ENST00000533249 CHCHD2Q9Y6H1 151 aaPredicted RBP21.02■□□□□ 0.96
PKP3-210ENST00000533249 ARHGAP21Q5T5U3 1957 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 FAM47E-STBD1D6RA91 191 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 PROM1O43490 865 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 EEDO75530 441 aaKnown RBP21.01■□□□□ 0.95
PKP3-210ENST00000533249 GPR75O95800 540 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 FBXO45P0C2W1 286 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 MTHFD2P13995 350 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 SERPINB3P29508 390 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 ARSKQ6UWY0 536 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 ZZZ3Q8IYH5 903 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 LRRC25Q8N386 305 aaPredicted RBP21.01■□□□□ 0.95
PKP3-210ENST00000533249 FBF1Q8TES7 1133 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 RIT1Q92963 219 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 PELOQ9BRX2 385 aaKnown RBP21.01■□□□□ 0.95
PKP3-210ENST00000533249 DOHHQ9BU89 302 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 PCDHGA11Q9Y5H2 935 aa21.01■□□□□ 0.95
PKP3-210ENST00000533249 LRRC14BA6NHZ5 514 aa21■□□□□ 0.95
PKP3-210ENST00000533249 TMPRSS11DO60235 418 aa21■□□□□ 0.95
PKP3-210ENST00000533249 DIAPH2O60879 1101 aa21■□□□□ 0.95
PKP3-210ENST00000533249 NR2F6P10588 404 aa21■□□□□ 0.95
PKP3-210ENST00000533249 GFAPP14136 432 aa21■□□□□ 0.95
PKP3-210ENST00000533249 ECHS1P30084 290 aa21■□□□□ 0.95
PKP3-210ENST00000533249 MAGEA4P43358 317 aa21■□□□□ 0.95
PKP3-210ENST00000533249 IST1P53990 364 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms