RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PRAMEF26H0Y7S4 382 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 CARTPTQ16568 116 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 MDGA1Q8NFP4 955 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 OR56A3Q8NH54 315 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 FKBP10Q96AY3 582 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 CA5BQ9Y2D0 317 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 HCFC2Q9Y5Z7 792 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 MYH9P35579 1960 aaKnown RBP14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 CSN2P05814 226 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 H2BFMP0C1H6 154 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 ACTC1P68032 377 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 ACTA1P68133 377 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 SGCAQ16586 387 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 DUS1LQ6P1R4 473 aaKnown RBP14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 OR5AR1Q8NGP9 310 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 ZUFSPQ96AP4 578 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TMED9Q9BVK6 235 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 HOXD1Q9GZZ0 328 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 PLOD2O00469 737 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 SPARCP09486 303 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 UGT3A2Q3SY77 523 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 KLHDC10Q6PID8 442 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 B3GNT9Q6UX72 402 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 PSD4Q8NDX1 1056 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 GAL3ST3Q96A11 431 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 RDH12Q96NR8 316 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 PKP2Q99959 881 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 A0A1B0GUL6 1792 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TEX13DA0A0J9YY54 714 aaPredicted RBP14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 ABHD17BQ5VST6 288 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 KIAA0895LQ68EN5 471 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 HSD11B1LQ7Z5J1 315 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 NFS1Q9Y697 457 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF12P17014 697 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 GRK5P34947 590 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 P2RY2P41231 377 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TNFRSF4P43489 277 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 CEBPGP53567 150 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA1BP68363 451 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA4AP68366 448 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 SCGB2B2Q4G0G5 96 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC27A4Q6P1M0 643 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 CYS1Q717R9 158 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA1AQ71U36 451 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 OR2T33Q8NG76 320 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 OR52B6Q8NGF0 335 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 HUS1BQ8NHY5 278 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 S100A16Q96FQ6 103 aaKnown RBP14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 MROQ9BYG7 248 aa14.12□□□□□ -0.15
PCDHA9-202ENST00000532602 GRIK2Q13002 908 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 NSDHLQ15738 373 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 OR4C11Q6IEV9 310 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CDHR3Q6ZTQ4 885 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TOE1Q96GM8 510 aaKnown RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 PRR11Q96HE9 360 aaPredicted RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 HSPA12BQ96MM6 686 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 OR52A4PA6NMU1 304 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 FDXRP22570 491 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 FGL2Q14314 439 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CLCA4Q14CN2 919 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF789Q5FWF6 425 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TCEANCQ8N8B7 351 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 KCNN1Q92952 543 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 DCSTAMPQ9H295 470 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 FTCDNL1E5RQL4 147 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CD63P08962 238 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 ADORA3P0DMS8 318 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 VMACQ2NL98 169 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM135Q86UB9 458 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC15A3Q8IY34 581 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CCDC115Q96NT0 180 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 NHSQ6T4R5 1651 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 GJE1A6NN92 205 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 PSKH1P11801 424 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 BCKDHAP12694 445 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 IL1RNP18510 177 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CXCL12P48061 93 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 ZXDBP98169 803 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 MALLQ13021 153 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 LRP8Q14114 963 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 SERTAD2Q14140 314 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 GINS1Q14691 196 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 CWF19L1Q69YN2 538 aaKnown RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC25A25Q6KCM7 469 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF554Q86TJ5 538 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 DCP2Q8IU60 420 aaKnown RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 LRRC42Q9Y546 428 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TOGARAM1Q9Y4F4 1720 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 C2orf92A0A1B0GVN3 265 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 BLMHQ13867 455 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TSTQ16762 297 aaKnown RBP14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA3EQ6PEY2 450 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 OR52P1PQ8NH57 321 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 RHBDD1Q8TEB9 315 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 DIO2Q92813 273 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 ZFYVE21Q9BQ24 234 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms