RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ERRFI1Q9UJM3 462 aaPredicted RBP21.31■■□□□ 1
CAPN1-222ENST00000532285 UTP20O75691 2785 aaKnown RBP21.31■■□□□ 1
CAPN1-222ENST00000532285 USP9YO00507 2555 aaPredicted RBP21.3■■□□□ 1
CAPN1-222ENST00000532285 KLRC4-KLRK1H3BQV0 150 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 HRKO00198 91 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 CHN1P15882 459 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 SOX3P41225 446 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 HTR6P50406 440 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 XKP51811 444 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 KCNK10P57789 538 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 ERVK-8P63133 956 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 SRSF11Q05519 484 aaKnown RBP21.3■■□□□ 1
CAPN1-222ENST00000532285 MPEG1Q2M385 716 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 SPIN4Q56A73 249 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 IL20RBQ6UXL0 311 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 SRRM1Q8IYB3 904 aaKnown RBP21.3■■□□□ 1
CAPN1-222ENST00000532285 POGLUT1Q8NBL1 392 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 PSMG3-AS1Q96PY0 264 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 FAIM2Q9BWQ8 316 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 MCM8Q9UJA3 840 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 CES1P1Q9UKY3 287 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 PSME2Q9UL46 239 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 ERVK-19Q9WJR5 959 aa21.3■■□□□ 1
CAPN1-222ENST00000532285 OR6B1O95007 311 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 UNC5CO95185 931 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 STSP08842 583 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 DEKP35659 375 aaKnown RBP21.29■■□□□ 1
CAPN1-222ENST00000532285 ACSM2AQ08AH3 577 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 C4orf17Q53FE4 359 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 KRTCAP3Q53RY4 240 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 PIGGQ5H8A4 983 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 ACSM2BQ68CK6 577 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 SLC48A1Q6P1K1 146 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 OPN5Q6U736 354 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 RNF111Q6ZNA4 994 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 SLC29A4Q7RTT9 530 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 MDGA2Q7Z553 956 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 C10orf107Q8IVU9 208 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 C9orf40Q8IXQ3 194 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 TMEM109Q9BVC6 243 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 CXorf21Q9HAI6 301 aa21.29■■□□□ 1
CAPN1-222ENST00000532285 GOLGA6L10A6NI86 522 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 OR6C76A6NM76 312 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 PEX1O43933 1283 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 CRCPO75575 148 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 CPMP14384 443 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 PORP16435 677 aaPredicted RBP21.28■■□□□ 1
CAPN1-222ENST00000532285 MEOX1P50221 254 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 FOXA1P55317 472 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 SLC37A1P57057 533 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 HMGCS1Q01581 520 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 ASPHQ12797 758 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 PCLAFQ15004 111 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 SULF2Q8IWU5 870 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 CPSF7Q8N684 471 aaKnown RBP21.28■■□□□ 1
CAPN1-222ENST00000532285 PSD4Q8NDX1 1056 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 DOK4Q8TEW6 326 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 RYDENQ9NUL5 291 aaKnown RBP21.28■■□□□ 1
CAPN1-222ENST00000532285 RAB21Q9UL25 225 aa21.28■■□□□ 1
CAPN1-222ENST00000532285 GNG14A0A1W2PPG7 69 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 A0A1W2PS29 197 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 WIPF3A6NGB9 483 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 PCDH7O60245 1069 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 TRIM13O60858 407 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 TUBBP07437 444 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 RAE1P78406 368 aaKnown RBP21.27■■□□□ 1
CAPN1-222ENST00000532285 RBPJQ06330 500 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 GTF3C1Q12789 2109 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.27■■□□□ 1
CAPN1-222ENST00000532285 C6orf163Q5TEZ5 329 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 SCIMPQ6UWF3 145 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 GALNT12Q8IXK2 581 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 SLC15A4Q8N697 577 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 SLC22A8Q8TCC7 542 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 APIPQ96GX9 242 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 SGCZQ96LD1 299 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 GPR137Q96N19 417 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 SMC6Q96SB8 1091 aa21.27■■□□□ 1
CAPN1-222ENST00000532285 DIDO1Q9BTC0 2240 aaKnown RBP21.27■□□□□ 0.99
CAPN1-222ENST00000532285 A0A1B0GUH1 482 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 NPIPA5E9PKD4 350 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 LRRTM2O43300 516 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 ERAL1O75616 437 aaKnown RBP21.26■□□□□ 0.99
CAPN1-222ENST00000532285 WISP2O76076 250 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 LDLRP01130 860 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 UROSP10746 265 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 DRD2P14416 443 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 ZNF24P17028 368 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 CSNK2A2P19784 350 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-222ENST00000532285 ALDH9A1P49189 494 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 BTKQ06187 659 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 SPDYAQ5MJ70 313 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 GALNT18Q6P9A2 607 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 RTL4Q6ZR62 310 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 TRIM46Q7Z4K8 759 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 SIAH3Q8IW03 269 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 MMP21Q8N119 569 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 GOLM1Q8NBJ4 401 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 KLHL29Q96CT2 875 aa21.26■□□□□ 0.99
CAPN1-222ENST00000532285 C11orf24Q96F05 449 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms