RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	CATSPERB	Q9H7T0	1116 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	SYTL2	Q9HCH5	934 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	ABI3	Q9P2A4	366 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	SLC23A2	Q9UGH3	650 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	IL19	Q9UHD0	177 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	AMACR	Q9UHK6	382 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	CD84	Q9UIB8	345 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	PADI2	Q9Y2J8	665 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	ZNF835	Q9Y2P0	537 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	JMJD1C	Q15652	2540 aa		5.37	□□□□□ -1.55
PUM1-222	ENST00000531867	COL6A5	A8TX70	2615 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	GXYLT2	A0PJZ3	443 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ARHGAP42	A6NI28	874 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	SLC9B1P1	A6NJY1	282 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM90A7P	A6NKC0	464 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	LINC00473	A8K010	186 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM90A22P	A8MWA6	464 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM90A12P	A8MX19	464 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM90A23P	A8MXZ1	464 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	EIF3CL	B5ME19	914 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867		H3BMH7	237 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CNOT3	O75175	753 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	LCA5L	O95447	670 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	UMOD	P07911	640 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CD63	P08962	238 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	SELL	P14151	372 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ZNF8	P17098	575 aa	Predicted RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	HTR7	P34969	479 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	THBS4	P35443	961 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CPOX	P36551	454 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	SYK	P43405	635 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	BMX	P51813	675 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MFAP4	P55083	255 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	HTD2	P86397	168 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FOLH1	Q04609	750 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	IL10RB	Q08334	325 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	TRAF2	Q12933	501 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MRPL28	Q13084	256 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MFAP5	Q13361	173 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	BMPR2	Q13873	1038 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	PTCHD3	Q3KNS1	767 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	SLC9B1	Q4ZJI4	515 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	TSTD2	Q5T7W7	516 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	LRRC66	Q68CR7	880 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	TRIM65	Q6PJ69	517 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MEX3B	Q6ZN04	569 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM71A	Q8IYT1	594 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CATSPER1	Q8NEC5	780 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	OR1L3	Q8NH93	324 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	GPT2	Q8TD30	523 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	PHF10	Q8WUB8	498 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	RXFP2	Q8WXD0	754 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	PTER	Q96BW5	349 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAR2	Q96K12	515 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ZNF599	Q96NL3	588 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM118B	Q9BPY3	351 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	C17orf62	Q9BQA9	187 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FERMT1	Q9BQL6	677 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	TIMM29	Q9BSF4	260 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	CINP	Q9BW66	212 aa	Predicted RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	NRIP3	Q9NQ35	241 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM207A	Q9NSI2	230 aa	Predicted RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MRPS18A	Q9NVS2	196 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ANO10	Q9NW15	660 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	ATXN10	Q9UBB4	475 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	OSGIN1	Q9UJX0	560 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	MEMO1	Q9Y316	297 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	PTRH2	Q9Y3E5	179 aa	Known RBP	5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	GTF3C1	Q12789	2109 aa		5.36	□□□□□ -1.55
PUM1-222	ENST00000531867	FLNA	P21333	2647 aa	Known RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867		A0A0J9YYE9	177 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	RGSL1	A5PLK6	1076 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	OR5K3	A6NET4	321 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	OR52A4P	A6NMU1	304 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867		C9J4A7	227 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	GOLGA8S	H3BPF8	625 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	SOCS6	O14544	535 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	LDB2	O43679	373 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	SLC19A2	O60779	497 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	WISP2	O76076	250 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	LSM8	O95777	96 aa	Known RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	TRBC1	P01850	177 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	HEXA	P06865	529 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	PDHA1	P08559	390 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	HBQ1	P09105	142 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	CYP11B1	P15538	503 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	ZFX	P17010	805 aa	Predicted RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	ZNF7	P17097	686 aa	Predicted RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	MMP11	P24347	488 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	SDC4	P31431	198 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	HSPA9	P38646	679 aa	Known RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	NDUFA8	P51970	172 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	KPNA2	P52292	529 aa	Known RBP	5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	AIF1	P55008	147 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	RBPJ	Q06330	500 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	NIPAL4	Q0D2K0	466 aa		5.35	□□□□□ -1.55
PUM1-222	ENST00000531867	SLC10A7	Q0GE19	358 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms