RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SLC44A1Q8WWI5 657 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF592Q92610 1267 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PIGTQ969N2 578 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 RHBDF1Q96CC6 855 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ART5Q96L15 291 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 WDR83Q9BRX9 315 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 TBCDQ9BTW9 1192 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 UGT2B28Q9BY64 529 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 RPF2Q9H7B2 306 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 NT5DC2Q9H857 520 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 LYRM4Q9HD34 91 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 DNAJC11Q9NVH1 559 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 ASIC3Q9UHC3 531 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.06
NEDD8-206ENST00000531430 COL6A5A8TX70 2615 aa8.46□□□□□ -1.06
NEDD8-206ENST00000531430 HIVEP2P31629 2446 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TLN2Q9Y4G6 2542 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 C2orf92A0A1B0GVN3 265 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 FAM95CA0A1B0GW59 222 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GLOD5A6NK44 160 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TAPBPO15533 448 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 PRKRAO75569 313 aaKnown RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TBX6O95947 436 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 FBXO45P0C2W1 286 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 ALOX15P16050 662 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 KRT15P19012 456 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GSTM2P28161 218 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TLX1P31314 330 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GCKP35557 465 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CPOXP36551 454 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 ELK3P41970 407 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 MAGEA3P43357 314 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CDK9P50750 372 aaKnown RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 RAP1GDS1P52306 607 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TAS2R39P59534 338 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 SORDQ00796 357 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CHIT1Q13231 466 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 C18orf63Q68DL7 685 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 VASNQ6EMK4 673 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TRMT10BQ6PF06 316 aaKnown RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 UBE3DQ7Z6J8 389 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CXorf67Q86X51 503 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GPSM1Q86YR5 675 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 SIMC1Q8NDZ2 872 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 C7orf57Q8NEG2 295 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 SPATA3Q8NHX4 192 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 ANKRD49Q8WVL7 239 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 RIT1Q92963 219 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 EXT2Q93063 718 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 ISL2Q96A47 359 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 WDYHV1Q96HA8 205 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 VPS39Q96JC1 886 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 RILPQ96NA2 401 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CCL19Q99731 98 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 OR51B5Q9H339 312 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 SH2D2AQ9NP31 389 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 TEX10Q9NXF1 929 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GALNT8Q9NY28 637 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CD274Q9NZQ7 290 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CHMP2BQ9UQN3 213 aa8.45□□□□□ -1.06
NEDD8-206ENST00000531430 CHCHD2Q9Y6H1 151 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-206ENST00000531430 GOLGA6L6A8MZA4 724 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 H0Y3Z8 333 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TRIM3O75382 744 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 STK16O75716 305 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 SNX4O95219 450 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 S100BP04271 92 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 HPNP05981 417 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF37AP17032 561 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 HIST1H1TP22492 207 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TCEA1P23193 301 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 SLCO1A2P46721 670 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 SLC6A12P48065 614 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 NAGLUP54802 743 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 DIO3P55073 304 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 RPP38P78345 283 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CDKL1Q00532 357 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 PLIN5Q00G26 463 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 PCDH1Q08174 1060 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 LAPTM5Q13571 262 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 ACKR1Q16570 336 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 NTRK2Q16620 822 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 ADPRMQ3LIE5 342 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 KBTBD12Q3ZCT8 623 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 DCST1Q5T197 706 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 RNASEH2BQ5TBB1 312 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 OR4C11Q6IEV9 310 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CAPN12Q6ZSI9 719 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 P4HA3Q7Z4N8 544 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 GPR180Q86V85 440 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 MYLK4Q86YV6 388 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CNTN4Q8IWV2 1026 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms