RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 DAPK2Q9UIK4 370 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 ZFR2Q9UPR6 939 aaKnown RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 A0A1W2PP55 124 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 MAN2B1O00754 1011 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 FUCA1P04066 466 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 ALOX5P09917 674 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 GADD45AP24522 165 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 KHKP50053 298 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 PPP5CP53041 499 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 CRISP3P54108 245 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 KRT33BQ14525 404 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 TMEM201Q5SNT2 666 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 ZNF776Q68DI1 518 aaPredicted RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 PLAG1Q6DJT9 500 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 UBE2Q1Q7Z7E8 422 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 BBS10Q8TAM1 723 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 CHFRQ96EP1 664 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 C1QTNF7Q9BXJ2 289 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 OR51I1Q9H343 314 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SERHL2Q9H4I8 314 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 MRPS30Q9NP92 439 aaKnown RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 FZD3Q9NPG1 666 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 CCDC59Q9P031 241 aaKnown RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 MYO10Q9HD67 2058 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 A0A1W2PRQ8 180 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ANTXRLA6NF34 631 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 TAF4O00268 1085 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 OR10H3O60404 316 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PTHP01270 115 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 OR12D1P0DN82 309 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 LIMK1P53667 647 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 FGL2Q14314 439 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ARMCX4Q5H9R4 360 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 MEDAGQ5VYS4 303 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ZNF513Q8N8E2 541 aaPredicted RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SRFBP1Q8NEF9 429 aaKnown RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ST13P5Q8NFI4 369 aaPredicted RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 FUZQ9BT04 418 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 NXF2Q9GZY0 626 aaKnown RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 RACGAP1Q9H0H5 632 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ZCCHC3Q9NUD5 404 aaKnown RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SERGEFQ9UGK8 458 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 IFT52Q9Y366 437 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 METTL15A6NJ78 407 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 TLR4O00206 839 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PRICKLE3O43900 615 aaPredicted RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SEMA7AO75326 666 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 UGT2B17O75795 530 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SERPIND1P05546 499 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 CEACAM5P06731 702 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 NR2F1P10589 423 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 FUT4P22083 530 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 CDH3P22223 829 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PSMD7P51665 324 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ALDH6A1Q02252 535 aaKnown RBP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.28■□□□□ 0.2
BRCA2-204ENST00000530893 COX10Q12887 443 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 UAP1L1Q3KQV9 507 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PRAMEF8Q5VWM4 474 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PRAMEF7Q5VXH5 474 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 C19orf48Q6RUI8 117 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 CD300LDQ6UXZ3 194 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ZNF793Q6ZN11 406 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 DEF8Q6ZN54 512 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 CACUL1Q86Y37 369 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 IL17RCQ8NAC3 791 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 FAM131CQ96AQ9 280 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SLC25A19Q9HC21 320 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 LMCD1Q9NZU5 365 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 SLC9A8Q9Y2E8 581 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 PCDHGA3Q9Y5H0 932 aa16.28■□□□□ 0.2
BRCA2-204ENST00000530893 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 ZW10O43264 779 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 PORP16435 677 aaPredicted RBP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 HIST1H1TP22492 207 aaPredicted RBP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 POU1F1P28069 291 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 BCL6P41182 706 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 WASP42768 502 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 CD97P48960 835 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 NCBP2P52298 156 aaKnown RBP eCLIP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 SEC23BQ15437 767 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 SYPL1Q16563 259 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 C2orf27AQ580R0 203 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 C12orf73Q69YU5 71 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 MRM1Q6IN84 353 aaKnown RBP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 ABHD17CQ6PCB6 329 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 AMER3Q8N944 861 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 OR2L5Q8NG80 312 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 OR52E1Q8NGJ3 308 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 XAGE5Q8WWM1 108 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 MS4A6EQ96DS6 147 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 CDCA3Q99618 268 aaPredicted RBP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 RSPO3Q9BXY4 272 aaPredicted RBP16.27■□□□□ 0.2
BRCA2-204ENST00000530893 AICDAQ9GZX7 198 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 KCNK6Q9Y257 313 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 HEBP2Q9Y5Z4 205 aa16.27■□□□□ 0.2
BRCA2-204ENST00000530893 SAGE2PA6NJ88 616 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms