RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ZNF700Q9H0M5 742 aa13.88□□□□□ -0.19
SRPRA-204ENST00000530680 ATP13A2Q9NQ11 1180 aa13.88□□□□□ -0.19
SRPRA-204ENST00000530680 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
SRPRA-204ENST00000530680 LOC102723996A0A087X1L8 192 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 SAGE2PA6NJ88 616 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 SCAMP2O15127 329 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 PDPK1O15530 556 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CPMP14384 443 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 PORP16435 677 aaPredicted RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 PRPS1L1P21108 318 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 LSP1P33241 339 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 IDH3AP50213 366 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 ARFIP2P53365 341 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 DIO3P55073 304 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 NME5P56597 212 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 SF3A3Q12874 501 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CHAF1BQ13112 559 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 AIMP2Q13155 320 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 PCOLCEQ15113 449 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 TERF2Q15554 542 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 LSM12Q3MHD2 195 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 DCAF10Q5QP82 559 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CPZQ66K79 652 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CPLX4Q7Z7G2 160 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 KBTBD2Q8IY47 623 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 APOBEC4Q8WW27 367 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 RIT1Q92963 219 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 ANKRD9Q96BM1 317 aaPredicted RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 MTERF3Q96E29 417 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 MAELQ96JY0 434 aaKnown RBP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 EGLN2Q96KS0 407 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CCDC28BQ9BUN5 200 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CNPPD1Q9BV87 410 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 BRINP2Q9C0B6 783 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 ING2Q9H160 280 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 SLC35C2Q9NQQ7 365 aa13.87□□□□□ -0.19
SRPRA-204ENST00000530680 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRPRA-204ENST00000530680 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 TGFBR3LH3BV60 316 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 SLC35E2P0CK97 266 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 NCF2P19878 526 aaPredicted RBP13.86□□□□□ -0.19
SRPRA-204ENST00000530680 MPIP34949 423 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 GPC1P35052 558 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 NCBP2P52298 156 aaKnown RBP eCLIP13.86□□□□□ -0.19
SRPRA-204ENST00000530680 EFNA3P52797 238 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 GSTA3Q16772 222 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 PGS1Q32NB8 556 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 CPTPQ5TA50 214 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 ANKRD26P1Q6NSI1 321 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 GALNT12Q8IXK2 581 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 MIER2Q8N344 545 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 RFWD2Q8NHY2 731 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 UCN3Q969E3 161 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 CLMPQ9H6B4 373 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 AIG1Q9NVV5 245 aa13.86□□□□□ -0.19
SRPRA-204ENST00000530680 A6NL46 340 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 B8ZZF3 427 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 ZNF195O14628 629 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 ALDOCP09972 364 aaKnown RBP13.85□□□□□ -0.19
SRPRA-204ENST00000530680 CCL11P51671 97 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 CLDN8P56748 225 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 SLC26A5P58743 744 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 IGLV3-21P80748 117 aaPredicted RBP13.85□□□□□ -0.19
SRPRA-204ENST00000530680 DPY19L1Q2PZI1 675 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 TMEM198Q66K66 360 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 SZRD1Q7Z422 152 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 GALNT16Q8N428 558 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 KRTCAP2Q8N6L1 136 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 B3GNT7Q8NFL0 401 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 PPWD1Q96BP3 646 aaKnown RBP13.85□□□□□ -0.19
SRPRA-204ENST00000530680 ZBED6CLQ96FA7 236 aaPredicted RBP13.85□□□□□ -0.19
SRPRA-204ENST00000530680 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 THOC3Q96J01 351 aaKnown RBP13.85□□□□□ -0.19
SRPRA-204ENST00000530680 MESP1Q9BRJ9 268 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 SEMA4CQ9C0C4 833 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 KCNK13Q9HB14 408 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 KLHL14Q9P2G3 628 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 CES1P1Q9UKY3 287 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 KCNMB2Q9Y691 235 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 PIEZO2Q9H5I5 2752 aa13.85□□□□□ -0.19
SRPRA-204ENST00000530680 TRBV11-1A0A0K0K1C0 115 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 GMNCA6NCL1 334 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 WASHC1A8K0Z3 465 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 CFLARO15519 480 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 ITGB2P05107 769 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 ALPPP05187 535 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 CLCN2P51788 898 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 MANFP55145 182 aaKnown RBP13.84□□□□□ -0.19
SRPRA-204ENST00000530680 HSPB3Q12988 150 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 RAPSNQ13702 412 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 LY6DQ14210 128 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 ZNF267Q14586 743 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-204ENST00000530680 ZNF750Q32MQ0 723 aa13.84□□□□□ -0.19
SRPRA-204ENST00000530680 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
SRPRA-204ENST00000530680 PLAG1Q6DJT9 500 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms