RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 LINC00518Q8N0U6 118 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 C4orf32Q8N8J7 132 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 LEMD2Q8NC56 503 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 CHDHQ8NE62 594 aaPredicted RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 C17orf47Q8NEP4 570 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 OR52E1Q8NGJ3 308 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 SLC13A3Q8WWT9 602 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 TAF15Q92804 592 aaKnown RBP eCLIP4.81□□□□□ -1.64
CASP4-208ENST00000530309 HIST1H2ACQ93077 130 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 C16orf58Q96GQ5 468 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 COG3Q96JB2 828 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 CAPNS2Q96L46 248 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 SPXQ9BT56 116 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 LRRCC1Q9C099 1032 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 KCNN3Q9UGI6 736 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 DNPEPQ9ULA0 475 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 MGAT4AQ9UM21 535 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 SPATA2Q9UM82 520 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 RPH3AQ9Y2J0 694 aaPredicted RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 GPRASP1Q5JY77 1395 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 TXNL1O43396 289 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 LRP3O75074 770 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 IGHV3-13P01766 116 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 SLC4A1P02730 911 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 STARD6P59095 220 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 ACY1Q03154 408 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 ITPK1Q13572 414 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 KLF5Q13887 457 aaPredicted RBP4.8□□□□□ -1.64
CASP4-208ENST00000530309 C1orf186Q6ZWK4 172 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 GTSCR1Q86UQ5 136 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 SLC22A16Q86VW1 577 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 CCDC71Q8IV32 467 aaPredicted RBP4.8□□□□□ -1.64
CASP4-208ENST00000530309 SAMD12Q8N8I0 201 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 OR8H1Q8NGG4 311 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 OR4F5Q8NH21 305 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 RDH11Q8TC12 318 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 FBXO25Q8TCJ0 367 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 RASL10AQ92737 203 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 HSD17B14Q9BPX1 270 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 SOSTQ9BQB4 213 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 UBXN6Q9BZV1 441 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 TRIM6Q9C030 488 aaPredicted RBP4.8□□□□□ -1.64
CASP4-208ENST00000530309 TNMDQ9H2S6 317 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 LIME1Q9H400 295 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 GNB4Q9HAV0 340 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.8□□□□□ -1.64
CASP4-208ENST00000530309 FBXO7Q9Y3I1 522 aa4.8□□□□□ -1.64
CASP4-208ENST00000530309 ARPC1BO15143 372 aaKnown RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 SYNGR4O95473 234 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 PDGFBP01127 241 aaPredicted RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 ALPPP05187 535 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 PGK2P07205 417 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 OR9G9P0C7N8 305 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 ALPPL2P10696 532 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 KRT5P13647 590 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 FOSL2P15408 326 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 CCL11P51671 97 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 NDST1P52848 882 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 EMC2Q15006 297 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 LPAL2Q16609 132 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 CMPK2Q5EBM0 449 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 C9orf66Q5T8R8 295 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 LIPJQ5W064 366 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 RHBDD2Q6NTF9 364 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 STEAP1BQ6NZ63 245 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 ZNF841Q6ZN19 808 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 ASRGL1Q7L266 308 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 GPR142Q7Z601 462 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 RELL2Q8NC24 303 aaPredicted RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 P3H4Q92791 437 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 XPO4Q9C0E2 1151 aaKnown RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 DCTPP1Q9H773 170 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 HOMER3Q9NSC5 361 aa4.79□□□□□ -1.64
CASP4-208ENST00000530309 EIF3KQ9UBQ5 218 aaKnown RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 ZNF346Q9UL40 294 aaKnown RBP4.79□□□□□ -1.64
CASP4-208ENST00000530309 NPC1L1Q9UHC9 1359 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 RNF212BA8MTL3 300 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 SH2D1BO14796 132 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
CASP4-208ENST00000530309 CXCL10P02778 98 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 HCKP08631 526 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 ACP1P24666 158 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 SHC1P29353 583 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
CASP4-208ENST00000530309 GSK3BP49841 420 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 ZNF131P52739 623 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 NLRP11P59045 1033 aaKnown RBP4.78□□□□□ -1.64
CASP4-208ENST00000530309 RPS4XP62701 263 aaKnown RBP4.78□□□□□ -1.64
CASP4-208ENST00000530309 CARTPTQ16568 116 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 HAGHQ16775 308 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 AGAP7PQ5VUJ5 663 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 NEK5Q6P3R8 708 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 EMBQ6PCB8 327 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 BNIPLQ7Z465 357 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 SLC47A2Q86VL8 602 aa4.78□□□□□ -1.64
CASP4-208ENST00000530309 CHCHD4Q8N4Q1 142 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms