RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 KRT71Q3SY84 523 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 LIPJQ5W064 366 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 RAET1GQ6H3X3 334 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 KIF6Q6ZMV9 814 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 TMEM26Q6ZUK4 368 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 BNIPLQ7Z465 357 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SYVN1Q86TM6 617 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 ADCK1Q86TW2 530 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 YRDCQ86U90 279 aaKnown RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SLC22A16Q86VW1 577 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 PARP8Q8N3A8 854 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF519Q8TB69 540 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 DQX1Q8TE96 717 aaKnown RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 ATP8B4Q8TF62 1192 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 MOCOSQ96EN8 888 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 C18orf12Q96KH6 178 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CAPNS2Q96L46 248 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
C11orf88-204ENST00000529661 VGLL1Q99990 258 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SYT11Q9BT88 431 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 DGCR6LQ9BY27 220 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 NMNAT2Q9BZQ4 307 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 RAB17Q9H0T7 212 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 IL1RAPQ9NPH3 570 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SPHK2Q9NRA0 654 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 NLGN3Q9NZ94 848 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 BAIAP2L1Q9UHR4 511 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 SH3BGRL2Q9UJC5 107 aa3.82□□□□□ -1.8
C11orf88-204ENST00000529661 CUX2O14529 1486 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ATP8B3O60423 1300 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 B4GAT1O43505 415 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 TSPAN2O60636 221 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 FHP07954 510 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZSCAN5DPP0CG00 497 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZCCHC18P0CG32 403 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 GNSP15586 552 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 PRDX6P30041 224 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 CHRNA3P32297 505 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 RPL9P32969 192 aaKnown RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 GSCP56915 257 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 GMFBP60983 142 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ABCE1P61221 599 aaKnown RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 GABPB1Q06547 395 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF177Q13360 481 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 P2RY14Q15391 338 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 CEBPEQ15744 281 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZSWIM7Q19AV6 140 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF528Q3MIS6 628 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 CDC42EP5Q6NZY7 148 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF440Q8IYI8 595 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 LRRC17Q8N6Y2 441 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 MINDY2Q8NBR6 621 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 TMEM45BQ96B21 275 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 C16orf45Q96MC5 204 aaPredicted RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 DCTN5Q9BTE1 182 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 CABLES2Q9BTV7 478 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 LIN28AQ9H9Z2 209 aaKnown RBP3.81□□□□□ -1.8
C11orf88-204ENST00000529661 NGBQ9NPG2 151 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 PAK5Q9P286 719 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 CLIP2Q9UDT6 1046 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 RABL2BQ9UNT1 228 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 ENTPD4Q9Y227 616 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 KLHDC2Q9Y2U9 406 aa3.81□□□□□ -1.8
C11orf88-204ENST00000529661 SYNJ2BP-COX16A0A087WUM0 186 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 IGHV3-38A0A0C4DH36 116 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 K7EPI3 171 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 TRAFD1O14545 582 aaPredicted RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 DUS4LO95620 317 aaKnown RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 FCER2P06734 321 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 PROS1P07225 676 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 HSPA1LP34931 641 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 MTIF2P46199 727 aaKnown RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 TKTL1P51854 596 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 NDST2P52849 883 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 RPL27P61353 136 aaKnown RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 FUT7Q11130 342 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 GCKRQ14397 625 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 MLF2Q15773 248 aaPredicted RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 CLPPQ16740 277 aaPredicted RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 TEX35Q5T0J7 233 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 IL23RQ5VWK5 629 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 RHBDD2Q6NTF9 364 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 NEPROQ6NW34 567 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 IRGCQ6NXR0 463 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 FAAP20Q6NZ36 180 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 LCLAT1Q6UWP7 414 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF730Q6ZMV8 503 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ZFAND4Q86XD8 727 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 COLGALT1Q8NBJ5 622 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ZBTB44Q8NCP5 570 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF540Q8NDQ6 660 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 OR56B1Q8NGI3 324 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 OR6F1Q8NGZ6 308 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 C11orf45Q8TAV5 145 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms