RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 UBFD1O14562 309 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 LRRTM2O43300 516 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ASNA1O43681 348 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 PEX1O43933 1283 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 CPMP14384 443 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 SOX3P41225 446 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 GSTM5P46439 218 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 XKP51811 444 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 KCNK10P57789 538 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ERVK-8P63133 956 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 IFFO1Q0D2I5 559 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF267Q14586 743 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 SPIN4Q56A73 249 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 CFAP157Q5JU67 520 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 TCHHL1Q5QJ38 904 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 LIPMQ5VYY2 423 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC48A1Q6P1K1 146 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 MYO7BQ6PIF6 2116 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 IL20RBQ6UXL0 311 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 RNF111Q6ZNA4 994 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 RTL4Q6ZR62 310 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 FRMD7Q6ZUT3 714 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC29A4Q7RTT9 530 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 MDGA2Q7Z553 956 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 TRABD2AQ86V40 505 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 SIAH3Q8IW03 269 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 C9orf40Q8IXQ3 194 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 DND1Q8IYX4 353 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 C4orf33Q8N1A6 199 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 MREGQ8N565 214 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 C1orf52Q8N6N3 182 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 CCDC63Q8NA47 563 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZFP62Q8NB50 900 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 GOLM1Q8NBJ4 401 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 PSD4Q8NDX1 1056 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 C16orf52Q8NHV5 167 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 FAIM2Q9BWQ8 316 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ACPTQ9BZG2 426 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 LIN28AQ9H9Z2 209 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 ERVK-19Q9WJR5 959 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 TIMM22Q9Y584 194 aa11.22□□□□□ -0.61
TRAPPC4-209ENST00000528230 FLNBO75369 2602 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 NPIPA5E9PKD4 350 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 HRKO00198 91 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR6B1O95007 311 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 TUBBP07437 444 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 DRD2P14416 443 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 CHN1P15882 459 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 PORP16435 677 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF24P17028 368 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 CSNK2A2P19784 350 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 MEOX1P50221 254 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC37A1P57057 533 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ACSM2AQ08AH3 577 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 FUT7Q11130 342 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ASPHQ12797 758 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ACSM2BQ68CK6 577 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 GALNT12Q8IXK2 581 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 CPSF7Q8N684 471 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 BANPQ8N9N5 519 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR7G1Q8NGA0 311 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR2W6PQ8NHA6 318 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC22A8Q8TCC7 542 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 TP53INP1Q96A56 240 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 C11orf24Q96F05 449 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 APOPT1Q96IL0 206 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 HBEGFQ99075 208 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 PARD6BQ9BYG5 372 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 NPIPA1Q9UND3 350 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF835Q9Y2P0 537 aa11.21□□□□□ -0.61
TRAPPC4-209ENST00000528230 ICE1Q9Y2F5 2266 aa11.21□□□□□ -0.62
TRAPPC4-209ENST00000528230 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.62
TRAPPC4-209ENST00000528230 USP9XQ93008 2570 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC4-209ENST00000528230 PTPN13Q12923 2485 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 TRIM13O60858 407 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 WISP2O76076 250 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 CLPSP04118 112 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 ATP1B1P05026 303 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 RNF224P0DH78 156 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 UROSP10746 265 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 CNR1P21554 472 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 SERPINB3P29508 390 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 CA7P43166 264 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 HTR6P50406 440 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 FOXA1P55317 472 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 SRSF11Q05519 484 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 MAP4K2Q12851 820 aa11.2□□□□□ -0.62
TRAPPC4-209ENST00000528230 HEPACAMQ14CZ8 416 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms