RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 GAL3ST4Q96RP7 486 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 WWTR1Q9GZV5 400 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 RAB17Q9H0T7 212 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ACTR8Q9H981 624 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 IGSF5Q9NSI5 407 aa16.11■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ANKRD33BA6NCL7 494 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 TP53I11O14683 189 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 PROM1O43490 865 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 RAD51CO43502 376 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 TMED10P49755 219 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 HNRNPH2P55795 449 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 HERVK_113P63132 956 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ERVK-8P63133 956 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 RPP38P78345 283 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 DLG1Q12959 904 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 CUL3Q13618 768 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SETDB1Q15047 1291 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 NTRK2Q16620 822 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 C18orf63Q68DL7 685 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 KLC3Q6P597 504 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ARSKQ6UWY0 536 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 NUDT13Q86X67 352 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SPATA4Q8NEY3 305 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 RIT1Q92963 219 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 PPWD1Q96BP3 646 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 MTERF1Q99551 399 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 DOHHQ9BU89 302 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SORBS1Q9BX66 1292 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ERVK-6Q9BXR3 956 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SEMA4BQ9NPR2 832 aaPredicted RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SNX15Q9NRS6 342 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 GRHL1Q9NZI5 618 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ERVK-19Q9WJR5 959 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 L3MBTL1Q9Y468 752 aa16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 TNPO3Q9Y5L0 923 aaKnown RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 CHCHD2Q9Y6H1 151 aaPredicted RBP16.1■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 A0A0A6YYD5 115 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 DVL2O14641 736 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SLC35E2P0CK97 266 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 GFAPP14136 432 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ENDOUP21128 410 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 DNAJA1P31689 397 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 MAGEA4P43358 317 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ALDH18A1P54886 795 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SLC37A1P57057 533 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 RPS13P62277 151 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ZNF267Q14586 743 aaPredicted RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ACAP2Q15057 778 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 EBPQ15125 230 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 C10orf62Q5T681 223 aaPredicted RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 C6orf163Q5TEZ5 329 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 PRAMEF20Q5VT98 475 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 TMEM198Q66K66 360 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 OR52E8Q6IFG1 317 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 MRM1Q6IN84 353 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 WDR53Q7Z5U6 358 aaPredicted RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 TP53INP1Q96A56 240 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 SPRR3Q9UBC9 169 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 FOXD3Q9UJU5 478 aaPredicted RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 CNOT11Q9UKZ1 510 aaKnown RBP16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 IKBKGQ9Y6K9 419 aa16.09■□□□□ 0.17
CKLF-CMTM1-202ENST00000527845 FAM221AA4D161 298 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 LRRC3CA6NJW4 275 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 AHRRA9YTQ3 701 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 FOXE1O00358 373 aaPredicted RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 CDH16O75309 829 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 SEMA3DO95025 777 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 MTHFD2P13995 350 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 GDF1P27539 372 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 ADH7P40394 386 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 PLTPP55058 493 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 NRG3P56975 720 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 RPS6KA2Q15349 733 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 PCBP2Q15366 365 aaKnown RBP eCLIP16.08■□□□□ 0.169e-7■■■■□ 24.1
CKLF-CMTM1-202ENST00000527845 HLA-DQA1Q5Y7H0 255 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 DGAT2L6Q6ZPD8 337 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 CCDC25Q86WR0 208 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 ULK2Q8IYT8 1036 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 CHDHQ8NE62 594 aaPredicted RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 OR10G3Q8NGC4 313 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 FBF1Q8TES7 1133 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 JSRP1Q96MG2 331 aaPredicted RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 ZNF717Q9BY31 904 aaPredicted RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 DNAJB12Q9NXW2 375 aaKnown RBP16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 ASB4Q9Y574 426 aa16.08■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 C2orf92A0A1B0GVN3 265 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 HRKO00198 91 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 FAM155BO75949 473 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 SNX4O95219 450 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 RFPL3SP0C7P2 107 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 FAM58BPP0C7Q3 252 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 BSGP35613 385 aa16.07■□□□□ 0.16
CKLF-CMTM1-202ENST00000527845 KIR2DL3P43628 341 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms