RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 QPRTQ15274 297 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 ZDHHC20Q5W0Z9 365 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 C16orf78Q8WTQ4 265 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 SPACA7Q96KW9 195 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 RPP25Q9BUL9 199 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 NLNQ9BYT8 704 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 SLC25A19Q9HC21 320 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 MIEF1Q9NQG6 463 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 GIMAP4Q9NUV9 329 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 SGTAO43765 313 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CPNE3O75131 537 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 ALX3O95076 343 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 ARAFP10398 606 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PIPP12273 146 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 IMPA1P29218 277 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 LIMS1P48059 325 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 LIM2P55344 173 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CAMK2BQ13554 666 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 HEPACAMQ14CZ8 416 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 REEP3Q6NUK4 255 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CEACAM20Q6UY09 585 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PHC2Q8IXK0 858 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 VWA5B2Q8N398 1253 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TRIM63Q969Q1 353 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 REPS1Q96D71 796 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SPIN1Q9Y657 262 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CFAP54Q96N23 3096 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SLCO2B1O94956 709 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 BCHEP06276 602 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 FURINP09958 794 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CHRNB1P11230 501 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 GNG2P59768 71 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 ARPC4P59998 168 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 HYAL2Q12891 473 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CCDC58Q4VC31 144 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 XKRXQ6PP77 449 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 WDR53Q7Z5U6 358 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 IQCF1Q8N6M8 205 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 NANOGP1Q8N7R0 232 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 GOT1L1Q8NHS2 421 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 IRF2BPLQ9H1B7 796 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 RNF121Q9H920 327 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 LSM2Q9Y333 95 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 HYKKA2RU49 373 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 B4DXG7 233 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 FFAR1O14842 300 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TPST2O60704 377 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 APOL3O95236 402 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 POP4O95707 220 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 LATS1O95835 1130 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 ADAP00813 363 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CSF3P09919 207 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 IL12RB1P42701 662 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SNRPGP62308 76 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 EEF1A2Q05639 463 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SEC23BQ15437 767 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 MPEG1Q2M385 716 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 LY6G5CQ5SRR4 150 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 DDI2Q5TDH0 399 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 C22orf39Q6P5X5 142 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SYCE2Q6PIF2 218 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 SLCO4C1Q6ZQN7 724 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CADM2Q8N3J6 435 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CHST14Q8NCH0 376 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 RASSF5Q8WWW0 418 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 NELL2Q99435 816 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN1-208ENST00000527323 MALT1Q9UDY8 824 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 DYRK1BQ9Y463 629 aa11.88□□□□□ -0.51
CAPN1-208ENST00000527323 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 WASH3PC4AMC7 463 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 TNFRSF10AO00220 468 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
CAPN1-208ENST00000527323 PDHA2P29803 388 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 SDC2P34741 201 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 ETV3P41162 512 aa11.87□□□□□ -0.51
CAPN1-208ENST00000527323 ILKQ13418 452 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms