RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 SERINC2Q96SA4 455 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 CMKLR1Q99788 373 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 C17orf62Q9BQA9 187 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 NDC1Q9BTX1 674 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 SLC25A23Q9BV35 468 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 NPLQ9BXD5 320 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 MS4A8Q9BY19 250 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 BRINP2Q9C0B6 783 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 MYLK2Q9H1R3 596 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 WDR55Q9H6Y2 383 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 DDX31Q9H8H2 851 aaKnown RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 COPS7BQ9H9Q2 264 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 LYRM4Q9HD34 91 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 FBXO8Q9NRD0 319 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 SDR39U1Q9NRG7 319 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 ATAD3AQ9NVI7 634 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 AIG1Q9NVV5 245 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 LYARQ9NX58 379 aaKnown RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 NDE1Q9NXR1 346 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 EHD3Q9NZN3 535 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 ING1Q9UK53 422 aaPredicted RBP3.62□□□□□ -1.83
C11orf54-204ENST00000527003 RARRES3Q9UL19 164 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 PSME2Q9UL46 239 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 SRPK3Q9UPE1 567 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 SH2B3Q9UQQ2 575 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 BTBD3Q9Y2F9 522 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 CAPN7Q9Y6W3 813 aa3.62□□□□□ -1.83
C11orf54-204ENST00000527003 DOCK9Q9BZ29 2069 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 PI4KAP42356 2102 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 RIF1Q5UIP0 2472 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 GOLGA4Q13439 2230 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 LOC105369274A0A096LPK9 316 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 IGHV5-51A0A0C4DH38 117 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 LOC102723532A0A0G2JNH3 316 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ATP6AP2A0A1C7CYW4 349 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 GNG14A0A1W2PPG7 69 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 A0A1W2PQM1 296 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HYKKA2RU49 373 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 FAM234BA2RU67 622 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 BBIP1A8MTZ0 92 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 H0YIG0 161 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 FCHO1O14526 889 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 SLC30A4O14863 429 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CFLARO15519 480 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ERI3O43414 337 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 KIF1CO43896 1103 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 PCDH7O60245 1069 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 GALR3O60755 368 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 TBX19O60806 448 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ATP6AP2O75787 350 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 OR2B3O76000 313 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 KIAA0754O94854 1291 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 NSA2O95478 260 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ONECUT2O95948 504 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 EIF2S1P05198 315 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 JUNP05412 331 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 KLK1P06870 262 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CYC1P08574 325 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ANXA4P09525 319 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 SMIM10L1P0DMW3 83 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 FGF5P12034 268 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 BCKDHAP12694 445 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 PVRP15151 417 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ALOX12P18054 663 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HIST1H1TP22492 207 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CALB2P22676 271 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ATP5A1P25705 553 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 PPP2R1BP30154 601 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 TIA1P31483 386 aaKnown RBP eCLIP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CSF2RBP32927 897 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 BSGP35613 385 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HPCAL1P37235 193 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 SSR2P43308 183 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 AVPR1BP47901 424 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 GABRA4P48169 554 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HTR6P50406 440 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HNRNPFP52597 415 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 MAPK12P53778 367 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 PLA2G16P53816 162 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 GFERP55789 205 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 KCNK10P57789 538 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 VSX2P58304 361 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 RPL38P63173 70 aaKnown RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CYP4F2P78329 520 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 HMGCS1Q01581 520 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 MC2RQ01718 297 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 MEF2AQ02078 507 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 NHLH1Q02575 133 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CFHR1Q03591 330 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF763Q0D2J5 394 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 TUBB3Q13509 450 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CYLC2Q14093 348 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 RFTN2Q52LD8 501 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 TCHHL1Q5QJ38 904 aaPredicted RBP3.61□□□□□ -1.83
C11orf54-204ENST00000527003 VWA5B1Q5TIE3 1220 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 ANXA8L1Q5VT79 327 aa3.61□□□□□ -1.83
C11orf54-204ENST00000527003 CCDC121Q6ZUS5 278 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms