RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ERI3O43414 337 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PROM1O43490 865 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 CHST10O43529 356 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 TMPRSS11DO60235 418 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ULK1O75385 1050 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 RDH16O75452 317 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 EEDO75530 441 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 CTAG2O75638 210 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 WISP2O76076 250 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PRR35P0CG20 571 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PIM1P11309 404 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ATP5A1P25705 553 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 TPP2P29144 1249 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 SERPINB1P30740 379 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ARFIP1P53367 373 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PLA2G16P53816 162 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 BTN3A2P78410 334 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 HMGCS1Q01581 520 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF33BQ06732 778 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 RGS1Q08116 209 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 TMEM35AQ53FP2 167 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 XKR7Q5GH72 579 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 OR4C11Q6IEV9 310 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PRMT9Q6P2P2 845 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 RIPOR1Q6ZS17 1223 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 RGS9BPQ6ZS82 235 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 CA13Q8N1Q1 262 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 METTL4Q8N3J2 472 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 TBC1D19Q8N5T2 526 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ACOT4Q8N9L9 421 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 TMEM52Q8NDY8 209 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 REPS1Q96D71 796 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 MMABQ96EY8 250 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 APIPQ96GX9 242 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 MRPL1Q9BYD6 325 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 DDX31Q9H8H2 851 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 BRF2Q9HAW0 419 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 SLCO1B3Q9NPD5 702 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 LANCL2Q9NS86 450 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
NEDD8-204ENST00000526430 SIRT5Q9NXA8 310 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 STMN3Q9NZ72 180 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 PTGFRNQ9P2B2 879 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 CTSFQ9UBX1 484 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 SNX6Q9UNH7 406 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 RAP2CQ9Y3L5 183 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 MPDZO75970 2070 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 A0A0A6YYD5 115 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 OR5H15A6NDH6 313 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 TGFBR3LH3BV60 316 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 CYR61O00622 381 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 KRT6AP02538 564 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 KRT6BP04259 564 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 LINC00032P0C843 101 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 HSD3B1P14060 373 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ACPPP15309 386 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 PRPH2P23942 346 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 HSD3B2P26439 372 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 CERS1P27544 350 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 KRT6CP48668 564 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 HNRNPFP52597 415 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 HNRNPH2P55795 449 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 STXBP1P61764 594 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 PMP22Q01453 160 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 MYBPHQ13203 477 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 HERC3Q15034 1050 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 NDUFA9Q16795 377 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 SH2D4BQ5SQS7 431 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 C10orf62Q5T681 223 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 TTC19Q6DKK2 380 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 CHSY3Q70JA7 882 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 MAVSQ7Z434 540 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 DOLPP1Q86YN1 238 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ZC3H7AQ8IWR0 971 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 GOLGA6L1Q8N7Z2 621 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 WFDC11Q8NEX6 87 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 OR51Q1Q8NH59 317 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 LILRB4Q8NHJ6 448 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 BRIX1Q8TDN6 353 aaKnown RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ASB5Q8WWX0 329 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 CCT6BQ92526 530 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 RMND5BQ96G75 393 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-204ENST00000526430 SERPINI1Q99574 410 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 LIME1Q9H400 295 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ELOVL6Q9H5J4 265 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF160Q9HCG1 818 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 THAP1Q9NVV9 213 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 IRAK4Q9NWZ3 460 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 GIMAP2Q9UG22 337 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 MKL2Q9ULH7 1088 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
NEDD8-204ENST00000526430 SONP18583 2426 aaKnown RBP10.17□□□□□ -0.78
NEDD8-204ENST00000526430 ARID1AO14497 2285 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms