RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 IGHV3-20A0A0C4DH32 117 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 GNG14A0A1W2PPG7 69 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 TCRBV16S1A1N1A0A5B0 115 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 OR2W5A6NFC9 320 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 TMEM233B4DJY2 109 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 CTNSO60931 367 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 SKAP2O75563 359 aaPredicted RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 SEC24DO94855 1032 aaPredicted RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 GBAP04062 536 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 PRF1P14222 555 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 MAOAP21397 527 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 PRPH2P23942 346 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 TIA1P31483 386 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS28-204ENST00000526054 ARRB2P32121 409 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 GSTM5P46439 218 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 HNRNPFP52597 415 aaKnown RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 OR4D2P58180 307 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 TRA2BP62995 288 aaKnown RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 BTG2P78543 158 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 PMP22Q01453 160 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 BTKQ06187 659 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 RBPJQ06330 500 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ACTN3Q08043 901 aaPredicted RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 BST1Q10588 318 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 STX4Q12846 297 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 SERTAD2Q14140 314 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 BTBD16Q32M84 506 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 SFT2D3Q587I9 215 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 OR52E8Q6IFG1 317 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 PAPD4Q6PIY7 484 aaKnown RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 CLNKQ7Z7G1 428 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 DNAJB8Q8NHS0 232 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 DYDC1Q8WWB3 177 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ITLN2Q8WWU7 325 aaPredicted RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 TANKQ92844 425 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 APIPQ96GX9 242 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 CCDC120Q96HB5 630 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 IMMP1LQ96LU5 166 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 CCT7Q99832 543 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 FAIM2Q9BWQ8 316 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 RUBCNLQ9H714 662 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 RPF2Q9H7B2 306 aaKnown RBP9.46□□□□□ -0.9
VPS28-204ENST00000526054 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 NECTIN3Q9NQS3 549 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 SIRT5Q9NXA8 310 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ZDHHC2Q9UIJ5 367 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ATG4BQ9Y4P1 393 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 ASB4Q9Y574 426 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.9
VPS28-204ENST00000526054 A0A1W2PR48 441 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 A8MUI8 341 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 NPIPB8E9PQR5 432 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 CCL21O00585 134 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 PIP5K1BO14986 540 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 PROM1O43490 865 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 ITM2AO43736 263 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 AIFM1O95831 613 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 LINC00032P0C843 101 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 MST1P26927 711 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 CA7P43166 264 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 RPL14P50914 215 aaKnown RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 CASP6P55212 293 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 SRSF11Q05519 484 aaKnown RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 ZNF763Q0D2J5 394 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 BIKQ13323 160 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 ART3Q13508 389 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 EXT1Q16394 746 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
VPS28-204ENST00000526054 ZNF766Q5HY98 468 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 NDUFAF5Q5TEU4 345 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 CES4AQ5XG92 561 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 C18orf63Q68DL7 685 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 SP5Q6BEB4 398 aaPredicted RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 PLAG1Q6DJT9 500 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 MTFR2Q6P444 385 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 GALNT18Q6P9A2 607 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 MCEMP1Q8IX19 187 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 BEST3Q8N1M1 668 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 AMER2Q8N7J2 671 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 ZNF781Q8N8C0 355 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 PPP3R2Q96LZ3 170 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 SORT1Q99523 831 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 PELOQ9BRX2 385 aaKnown RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 EBPLQ9BY08 206 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 TUBB1Q9H4B7 451 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 ADAP2Q9NPF8 381 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 INTS9Q9NV88 658 aaKnown RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 THAP1Q9NVV9 213 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 C1orf109Q9NX04 203 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 TEX10Q9NXF1 929 aaPredicted RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 STMN3Q9NZ72 180 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 HAO1Q9UJM8 370 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 TMED5Q9Y3A6 229 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 KLF2Q9Y5W3 355 aaPredicted RBP9.45□□□□□ -0.9
VPS28-204ENST00000526054 PTGDR2Q9Y5Y4 395 aa9.45□□□□□ -0.9
VPS28-204ENST00000526054 PCNX1Q96RV3 2341 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms