RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZNF789Q5FWF6 425 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ENTPD8Q5MY95 495 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 UBAP2Q5T6F2 1119 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PMS2CLQ68D20 193 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 AAGABQ6PD74 315 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 DOK6Q6PKX4 331 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TMEM220Q6QAJ8 160 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PACS1Q6VY07 963 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GCNT7Q6ZNI0 430 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 MARK2Q7KZI7 788 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 DET1Q7L5Y6 550 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TAOK1Q7L7X3 1001 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GALNTL5Q7Z4T8 443 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ADGRG6Q86SQ4 1221 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 IQCHQ86VS3 1027 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TDRPQ86YL5 185 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 FAM185AQ8N0U4 392 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CLDN19Q8N6F1 224 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TMEM217Q8N7C4 229 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RASGEF1AQ8N9B8 481 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 DDHD1Q8NEL9 900 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 OR56A4Q8NGH8 313 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CEP76Q8TAP6 659 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 SLC44A1Q8WWI5 657 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ANKRD7Q92527 254 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 HTRA1Q92743 480 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TSACCQ96A04 125 aaPredicted RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 MTBPQ96DY7 904 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ATXN7L3BQ96GX2 97 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ZNF514Q96K75 400 aaPredicted RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 ZIM3Q96PE6 472 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RUFY1Q96T51 708 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PAFAH2Q99487 392 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RBBP8Q99708 897 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CCM2Q9BSQ5 444 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TMEM109Q9BVC6 243 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TSSK1BQ9BXA7 367 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TWSG1Q9GZX9 223 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 OR2AG1Q9H205 316 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 P2RY12Q9H244 342 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RHOJQ9H4E5 214 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RMI1Q9H9A7 625 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 VIPAS39Q9H9C1 493 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CHODLQ9H9P2 273 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PLEKHA2Q9HB19 425 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TM9SF3Q9HD45 589 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ABCF3Q9NUQ8 709 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GNPTGQ9UJJ9 305 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PILRBQ9UKJ0 227 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RAB23Q9ULC3 237 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CORO1CQ9ULV4 474 aaPredicted RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 PCDHGB5Q9Y5G0 923 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NFS1Q9Y697 457 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TDRD6O60522 2096 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 TNRC6BQ9UPQ9 1833 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 A0A087X0M5 115 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 SPTY2D1-AS1A0A0U1RR47 76 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 C17orf113A0A1B0GUU1 675 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 A0A1B0GX30 115 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 A0A1W2PR77 199 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 GOLGA6L10A6NI86 522 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 SMIM23A6NLE4 172 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 IQCF5A8MTL0 148 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 E5RI56 91 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CHUKO15111 745 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 KMOO15229 486 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RGS16O15492 202 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 CDH16O75309 829 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 VPS26AO75436 327 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 TOMM40O96008 361 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 FTH1P02794 183 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 MT-ND3P03897 115 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 APOA4P06727 396 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 F7P08709 466 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 MYZAPP0CAP1 466 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CYP4B1P13584 511 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ACP5P13686 325 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CTSEP14091 401 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 STMN1P16949 149 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 VCLP18206 1134 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CD9P21926 228 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RPS3P23396 243 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP48-211ENST00000526044 GCAP28676 217 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CRABP2P29373 138 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 TYK2P29597 1187 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 BLKP51451 505 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CTSCP53634 463 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 LIMK2P53671 638 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 TAS2R39P59534 338 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 SRP54P61011 504 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 PPARDQ03181 441 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CDC16Q13042 620 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 DNAJC3Q13217 504 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 EFTUD2Q15029 972 aaKnown RBP eCLIP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms