RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CSTF2P33240 577 aaKnown RBP eCLIP1.42□□□□□ -2.18
CD44-212ENST00000524922 MLLT10P55197 1068 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ARPP19P56211 112 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 SNX16P57768 344 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 KIAA1024LP59773 190 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 KRT83P78385 493 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 NUCB1Q02818 461 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 KDSRQ06136 332 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 INCA1Q0VD86 236 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GALNT2Q10471 571 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 MAD2L1Q13257 205 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 OLIG2Q13516 323 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 TRIM29Q14134 588 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 FZD2Q14332 565 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 BRD3Q15059 726 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 P2RY6Q15077 328 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GLIPR1L2Q4G1C9 344 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 VWA2Q5GFL6 755 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 RAB41Q5JT25 222 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 DCAF10Q5QP82 559 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 NAA35Q5VZE5 725 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 WSCD1Q658N2 575 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 TMEM215Q68D42 235 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 PM20D1Q6GTS8 502 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GUSBP11Q6P575 273 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 PODNL1Q6PEZ8 512 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CWC27Q6UX04 472 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 GCNT7Q6ZNI0 430 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 Q6ZPB1 254 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 RRM2BQ7LG56 351 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EFL1Q7Z2Z2 1120 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 PRSS42Q7Z5A4 293 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 TSPAN33Q86UF1 283 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 PAQR7Q86WK9 346 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 UNC45BQ8IWX7 931 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 PM20D2Q8IYS1 436 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 DAW1Q8N136 415 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 SLC22A18ASQ8N1D0 253 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 RASGEF1CQ8N431 466 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GBGT1Q8N5D6 347 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 LINC00612Q8N6U2 182 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ZNF611Q8N823 705 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ZNF614Q8N883 585 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 HJURPQ8NCD3 748 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 OR2T12Q8NG77 320 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OR1J2Q8NGS2 313 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ZFAND2BQ8WV99 257 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 TEKT4Q8WW24 435 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ITLN2Q8WWU7 325 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 OR8D1Q8WZ84 308 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 IRGQQ8WZA9 623 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 FBXO32Q969P5 355 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 MYLPFQ96A32 169 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ISG20Q96AZ6 181 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 PCED1BQ96HM7 432 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OXNAD1Q96HP4 312 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 AK8Q96MA6 479 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CYP2S1Q96SQ9 504 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OMDQ99983 421 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 SLC25A23Q9BV35 468 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 LRRC61Q9BV99 259 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 STRA6Q9BX79 667 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EDEM3Q9BZQ6 932 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 NEUROG2Q9H2A3 272 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 RAD21L1Q9H4I0 556 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 PARVGQ9HBI0 331 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 MRPL40Q9NQ50 206 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 MBNL1Q9NR56 388 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 PLCXD1Q9NUJ7 323 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 INTS10Q9NVR2 710 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 DPP3Q9NY33 737 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 KLHL8Q9P2G9 620 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 EPHA6Q9UF33 1036 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 APOBEC3BQ9UH17 382 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 GGA2Q9UJY4 613 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EXOC7Q9UPT5 735 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 MTMR6Q9Y217 621 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EXOGQ9Y2C4 368 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 AAR2Q9Y312 384 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 JRKLQ9Y4A0 524 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 SLCO1B1Q9Y6L6 691 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 DOCK9Q9BZ29 2069 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CITO14578 2027 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ZGRF1Q86YA3 2104 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ZNF106Q9H2Y7 1883 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 SCN8AQ9UQD0 1980 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CEP192Q8TEP8 1941 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ANAPC1Q9H1A4 1944 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 IGHV5-10-1A0A0J9YXX1 117 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 A0A1W2PQ67 120 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MEX3AA1L020 520 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 TSPAN11A1L157 253 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 TMEM150BA6NC51 233 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 OR5K4A6NMS3 321 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 A8MU10 97 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FPGTO14772 594 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 HS3ST1O14792 307 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MAPK13O15264 365 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 BUB1O43683 1085 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 DUX1O43812 170 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms