RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF789Q5FWF6 425 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TEX35Q5T0J7 233 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 STPG1Q5TH74 334 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 FAM69BQ5VUD6 431 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ALS2CLQ60I27 953 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 STEAP4Q687X5 459 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NAPEPLDQ6IQ20 393 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF449Q6P9G9 518 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 C4orf22Q6V702 233 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PPP1R21Q6ZMI0 780 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TUBA1AQ71U36 451 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ASCL5Q7RTU5 278 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ABI3BPQ7Z7G0 1075 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 LDB1Q86U70 411 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TMEM135Q86UB9 458 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 HOOK3Q86VS8 718 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DENND6AQ8IWF6 608 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SFTPA2Q8IWL1 248 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PIANPQ8IYJ0 282 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ZCCHC9Q8N567 271 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DCLK2Q8N568 766 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ATG16L2Q8NAA4 619 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MCUQ8NE86 351 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 FBXO36Q8NEA4 188 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CADM4Q8NFZ8 388 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 STT3BQ8TCJ2 826 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 LKAAEAR1Q8TD35 194 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 BRSK1Q8TDC3 778 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CXorf40AQ8TE69 158 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 GANCQ8TET4 914 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RAB7BQ96AH8 199 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MTBPQ96DY7 904 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NUS1Q96E22 293 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SCMH1Q96GD3 660 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SNF8Q96H20 258 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 COX14Q96I36 57 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DNAJC1Q96KC8 554 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TBATAQ96M53 351 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 OR1F2PQ96R84 312 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RANBP9Q96S59 729 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TUBA1CQ9BQE3 449 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RHOXF2Q9BQY4 288 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RIOK2Q9BVS4 552 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SLC17A9Q9BYT1 436 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 WDR12Q9GZL7 423 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ARRDC1-AS1Q9H2J1 176 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CXorf56Q9H5V9 222 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 FAM96AQ9H5X1 160 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 EVA1AQ9H8M9 152 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UBTD1Q9HAC8 227 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A7Q9HAW7 530 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A10Q9HAW8 530 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A8Q9HAW9 530 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SGK2Q9HBY8 427 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MAGEE1Q9HCI5 957 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PREBQ9HCU5 417 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TM9SF3Q9HD45 589 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 IL26Q9NPH9 171 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MRPL40Q9NQ50 206 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DYRK4Q9NR20 520 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NLE1Q9NVX2 485 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MARCH4Q9P2E8 410 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PILRBQ9UKJ0 227 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RPL26L1Q9UNX3 145 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CHMP2BQ9UQN3 213 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NCKAP1Q9Y2A7 1128 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 LRCH1Q9Y2L9 728 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 OR1A2Q9Y585 309 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PRSS21Q9Y6M0 314 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NOTCH3Q9UM47 2321 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 A0A1W2PQ67 120 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 HEATR9A2RTY3 570 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CCDC162PA2VCL2 907 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LRRC72A6NJI9 287 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MEI4A8MW99 385 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 H0Y3Z8 333 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PSMD11O00231 422 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 INPP4BO15327 924 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PSMD3O43242 534 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 OR1I1O60431 355 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MTX2O75431 263 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF189O75820 626 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SRP72O76094 671 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SLU7O95391 586 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 EML2O95834 649 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 GOT2P00505 430 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 IL1AP01583 271 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CSF1P09603 554 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 THEGLP0DJG4 465 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 GIMD1P0DJR0 217 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MLNP12872 115 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CD27P26842 260 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 GCAP28676 217 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 OXTRP30559 389 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SPAM1P38567 509 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NPY2RP49146 381 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LMAN1P49257 510 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CENPAP49450 140 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms