RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TP53P04637 393 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-211ENST00000523441 FBXO45P0C2W1 286 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 GABRB3P28472 473 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 KCNJ5P48544 419 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 DIO3P55073 304 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 VEZF1Q14119 521 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 PODNL1Q6PEZ8 512 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 SBSNQ6UWP8 590 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 ZNF793Q6ZN11 406 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 RNF111Q6ZNA4 994 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 SLCO4C1Q6ZQN7 724 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 FRA10AC1Q70Z53 315 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 VN1R5Q7Z5H4 357 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 KRT78Q8N1N4 520 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 CNEP1R1Q8N9A8 125 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 C2CD4AQ8NCU7 369 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-211ENST00000523441 NUBPLQ8TB37 319 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 RBM18Q96H35 190 aaKnown RBP10.61□□□□□ -0.71
SDCBP-211ENST00000523441 SERPINB12Q96P63 405 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 KRT12Q99456 494 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 WWTR1Q9GZV5 400 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 CALHM2Q9HA72 323 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 C15orf41Q9Y2V0 281 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 SPACA6W5XKT8 324 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 CR1P17927 2039 aa10.61□□□□□ -0.71
SDCBP-211ENST00000523441 RAI1Q7Z5J4 1906 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 WASHC1A8K0Z3 465 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TP53I11O14683 189 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 OR10H2O60403 315 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 CLEC3AO75596 197 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TBX6O95947 436 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 IL18BPO95998 194 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 IFNA2P01563 188 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 AHSGP02765 367 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 HPNP05981 417 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 PCNAP12004 261 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 GNAZP19086 355 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 STT3AP46977 705 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 STARP49675 285 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ATP5J2P56134 94 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 SIRPAP78324 504 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TGM3Q08188 693 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TBL3Q12788 808 aaKnown RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ZNF460Q14592 562 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 HP1BP3Q5SSJ5 553 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ALKBH2Q6NS38 261 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ANGPTL8Q6UXH0 198 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 PLEKHM3Q6ZWE6 761 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 P4HA3Q7Z4N8 544 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TAGAPQ8N103 731 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 FAM83FQ8NEG4 500 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TTLQ8NG68 377 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 TMEM171Q8WVE6 324 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ESAMQ96AP7 390 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 SECISBP2Q96T21 854 aaKnown RBP10.6□□□□□ -0.71
SDCBP-211ENST00000523441 SFXN3Q9BWM7 321 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 PRDM7Q9NQW5 492 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 ZNF226Q9NYT6 803 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 MAPRE3Q9UPY8 281 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 USF3Q68DE3 2245 aa10.6□□□□□ -0.71
SDCBP-211ENST00000523441 GLOD5A6NK44 160 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 A8MXE2 369 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 PHF1O43189 567 aaPredicted RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 TGFB1P01137 390 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 ENO2P09104 434 aaPredicted RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 CCDC175P0C221 793 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 ATP5A1P25705 553 aaKnown RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 CXCR5P32302 372 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 SSR2P43308 183 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 PLIN5Q00G26 463 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 CRYMQ14894 314 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 NNATQ16517 81 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 NTRK2Q16620 822 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 FNDC7Q5VTL7 733 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 HLA-DQA1Q5Y7H0 255 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 C18orf63Q68DL7 685 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 DESI1Q6ICB0 168 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 GRAMD2AQ8IUY3 354 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 LMNTD2Q8IXW0 634 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 RNF175Q8N4F7 328 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 SLC15A4Q8N697 577 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 ACOT4Q8N9L9 421 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 OR1J4Q8NGS1 313 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 OR14L1PQ8NHC6 308 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 ART5Q96L15 291 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 TM9SF2Q99805 663 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 BAG1Q99933 345 aaPredicted RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 XAB2Q9HCS7 855 aaKnown RBP10.59□□□□□ -0.71
SDCBP-211ENST00000523441 SERHLQ9NQF3 203 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 PACSIN3Q9UKS6 424 aa10.59□□□□□ -0.71
SDCBP-211ENST00000523441 C2orf92A0A1B0GVN3 265 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 RCBTB2O95199 551 aa10.58□□□□□ -0.72
SDCBP-211ENST00000523441 ALOX15P16050 662 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms