RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 OTULINQ96BN8 352 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 FBXL8Q96CD0 374 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 MS4A14Q96JA4 679 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 NAP1L3Q99457 506 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-208ENST00000520228 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 ABCG4Q9H172 646 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 DPEP2Q9H4A9 486 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 SCPEP1Q9HB40 452 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 IL26Q9NPH9 171 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 IL17CQ9P0M4 197 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 VPS18Q9P253 973 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 PAK5Q9P286 719 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 NFKBIL1Q9UBC1 381 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-208ENST00000520228 PYCARDQ9ULZ3 195 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 ARL5AQ9Y689 179 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 NYNRINQ9P2P1 1898 aaKnown RBP6.61□□□□□ -1.35
SDCBP-208ENST00000520228 TNRC6BQ9UPQ9 1833 aaKnown RBP6.61□□□□□ -1.35
SDCBP-208ENST00000520228 CHD8Q9HCK8 2581 aa6.61□□□□□ -1.35
SDCBP-208ENST00000520228 NUP205Q92621 2012 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GLYATL1P3A0A0U1RQE8 302 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ERI2A8K979 691 aaKnown RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 WNT9BO14905 357 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GRID2O43424 1007 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ITM2AO43736 263 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A9O60656 530 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 NTN1O95631 604 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GAS8O95995 478 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GP1BAP07359 652 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ZSCAN5DPP0CG00 497 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A6P19224 532 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A1P22309 533 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A4P22310 534 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 CDAP32320 146 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 RPL22P35268 128 aaKnown RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A3P35503 534 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A5P35504 534 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 BSGP35613 385 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 SPAM1P38567 509 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 KCNJ1P48048 391 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 NUDT6P53370 316 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GNG11P61952 73 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 DCAF7P61962 342 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 TMEM115Q12893 351 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 PEX6Q13608 980 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 CHRNA6Q15825 494 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ATP13A5Q4VNC0 1218 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 PYCR3Q53H96 274 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GUSBP11Q6P575 273 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 FAM151BQ6UXP7 276 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 EFL1Q7Z2Z2 1120 aaKnown RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 PRUNE1Q86TP1 453 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 TMPRSS12Q86WS5 348 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 NRROSQ86YC3 692 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 SLC35F3Q8IY50 421 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 RASGEF1CQ8N431 466 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ARL10Q8N8L6 244 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 PRELID2Q8N945 189 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 DNAAF3Q8N9W5 541 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 OR4K2Q8NGD2 314 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 CCL4L1Q8NHW4 92 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 B4GALNT2Q8NHY0 566 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 GDAP1Q8TB36 358 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 DTX3LQ8TDB6 740 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 NAT6Q93015 286 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 MAGOHBQ96A72 148 aaKnown RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 OR2M4Q96R27 311 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 AP1M1Q9BXS5 423 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 OR2AG1Q9H205 316 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A7Q9HAW7 530 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A10Q9HAW8 530 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 UGT1A8Q9HAW9 530 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 HIF1ANQ9NWT6 349 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 TAAR2Q9P1P5 351 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ATXN10Q9UBB4 475 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 KLK13Q9UKR3 277 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 TTC7AQ9ULT0 858 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 SNX12Q9UMY4 172 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 NEUROG3Q9Y4Z2 214 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 U3KQA8 63 aa6.6□□□□□ -1.35
SDCBP-208ENST00000520228 ASCC3Q8N3C0 2202 aaKnown RBP6.6□□□□□ -1.35
SDCBP-208ENST00000520228 EME2A4GXA9 379 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-208ENST00000520228 FAM149AA5PLN7 773 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 GPR89AB7ZAQ6 455 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 PGRMC1O00264 195 aaKnown RBP6.59□□□□□ -1.35
SDCBP-208ENST00000520228 VEGFDO43915 354 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 PAGE4O60829 102 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 MTX2O75431 263 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 CDK14O94921 469 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 APRTP07741 180 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 GPR89BP0CG08 455 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 TCP1P17987 556 aaKnown RBP6.59□□□□□ -1.35
SDCBP-208ENST00000520228 CHMP24386 653 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 AK4P27144 223 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-208ENST00000520228 HADHAP40939 763 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 ACTR1BP42025 376 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 AMTP48728 403 aa6.59□□□□□ -1.35
SDCBP-208ENST00000520228 ZNF140P52738 457 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-208ENST00000520228 ACTR1AP61163 376 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms