RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CCDC51Q96ER9 411 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 RAB11FIP5Q9BXF6 653 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 RIBC2Q9H4K1 309 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ACTR8Q9H981 624 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 KCNK13Q9HB14 408 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 B3GAT2Q9NPZ5 323 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 PLCXD1Q9NUJ7 323 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 TMEM181Q9P2C4 612 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 TUBGCP4Q9UGJ1 667 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF175Q9Y473 711 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ATG4BQ9Y4P1 393 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 LOC105371242A0A075B767 164 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 LOC390937A0A1W2PQ73 354 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 TRAFD1O14545 582 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 IDH1O75874 414 aaKnown RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 AMBPP02760 352 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 TRPC1P48995 793 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 NDST2P52849 883 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 PMP22Q01453 160 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 LRIT3Q3SXY7 679 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 DCAF12Q5T6F0 453 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 NEPROQ6NW34 567 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 LCLAT1Q6UWP7 414 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 PAQR9Q6ZVX9 377 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 RANBP3LQ86VV4 465 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 NR2C2APQ86WQ0 139 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF573Q86YE8 665 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 TBC1D10CQ8IV04 446 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ICA1LQ8NDH6 482 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF397Q8NF99 534 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 NUP37Q8NFH4 326 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 PNPLA2Q96AD5 504 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 VPS39Q96JC1 886 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 DUX3Q96PT4 197 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ALKBH3Q96Q83 286 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 DGCR6LQ9BY27 220 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 FGF22Q9HCT0 170 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 STARD5Q9NSY2 213 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 CGNQ9P2M7 1197 aaKnown RBP4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF580Q9UK33 172 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 SLC6A5Q9Y345 797 aa4.5□□□□□ -1.69
HMGB1P46-201ENST00000520062 ABCC4O15439 1325 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ANKRD30BLA7E2S9 258 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 MPTX1A8MV57 137 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 TMCO5BA8MYB1 307 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 LANCL1O43813 399 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZFAND5O76080 213 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 APBB3O95704 486 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 CLDN1O95832 211 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 CALCAP01258 141 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 SP1P08047 785 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 HSPA5P11021 654 aaKnown RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF26P17031 533 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 TNNI3P19429 210 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 PRKACGP22612 351 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 DPP4P27487 766 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 PTPN4P29074 926 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 PDHA2P29803 388 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 PPP2R1AP30153 589 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 MAT2AP31153 395 aaKnown RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 MTIF2P46199 727 aaKnown RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 GSCP56915 257 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 KRTAP10-11P60412 298 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 RPS4XP62701 263 aaKnown RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF177Q13360 481 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 KIAA0141Q14154 515 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 SLC17A1Q14916 467 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 MLF2Q15773 248 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 UPP1Q16831 310 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 BSPRYQ5W0U4 402 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 STEAP1BQ6NZ63 245 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 LRRC8BQ6P9F7 803 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 DENND6BQ8NEG7 585 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF519Q8TB69 540 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 FBXO25Q8TCJ0 367 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 SPPL2AQ8TCT8 520 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 DTNBP1Q96EV8 351 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 NSMCE3Q96MG7 304 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 LITAFQ99732 161 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 NLNQ9BYT8 704 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 DCTPP1Q9H773 170 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 COG4Q9H9E3 785 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 SLC25A19Q9HC21 320 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 YAE1D1Q9NRH1 226 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 NDE1Q9NXR1 346 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 PROCRQ9UNN8 238 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 CUX2O14529 1486 aa4.49□□□□□ -1.69
HMGB1P46-201ENST00000520062 A0A087X002 238 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 A0A0U1RQV5 110 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 A0A1B0GUL7 405 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 G3V2L1 256 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 STK17BO94768 372 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms