RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 IL12AP29459 219 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 FEN1P39748 380 aaKnown RBP13.25□□□□□ -0.29
SDC2-203ENST00000519587 STT3AP46977 705 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.291e-8■□□□□ 8.1
SDC2-203ENST00000519587 OR4D2P58180 307 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 CLN3Q13286 438 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 SSPNQ14714 243 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 TERF2Q15554 542 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 ELAVL1Q15717 326 aaKnown RBP13.25□□□□□ -0.29
SDC2-203ENST00000519587 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 OR4F3Q6IEY1 312 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 LAPTM4BQ86VI4 370 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 CNRIP1Q96F85 164 aaPredicted RBP13.25□□□□□ -0.29
SDC2-203ENST00000519587 RBM18Q96H35 190 aaKnown RBP13.25□□□□□ -0.29
SDC2-203ENST00000519587 ART5Q96L15 291 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 NECTIN3Q9NQS3 549 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 PCDHGB4Q9UN71 923 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 APC2O95996 2303 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 ACACAQ13085 2346 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 MAST4O15021 2626 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 HELZ2Q9BYK8 2649 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 PRSS51A0A1B0GVH4 220 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 MYO1GB0I1T2 1018 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 C9JVG2 144 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 RRP8O43159 456 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 CREG1O75629 220 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 UMODP07911 640 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 SNRPB2P08579 225 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 OTX2P32243 289 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 GALNSP34059 522 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 GPC1P35052 558 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 FRKP42685 505 aaPredicted RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 MANFP55145 182 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 RPS18P62269 152 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 TGIF1Q15583 401 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 CEBPEQ15744 281 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 ZNF385BQ569K4 471 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 FAM91A1Q658Y4 838 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 CPZQ66K79 652 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 TMEM205Q6UW68 189 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 GK5Q6ZS86 529 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 ANKRD37Q7Z713 158 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 VASH2Q86V25 355 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 GALNT12Q8IXK2 581 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 OR14A16Q8NHC5 309 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 DAZLQ92904 295 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 CIDECQ96AQ7 238 aaPredicted RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 CMTM5Q96DZ9 223 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 ITCHQ96J02 903 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 SLC45A3Q96JT2 553 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 ZNF681Q96N22 645 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 AMDHD1Q96NU7 426 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
SDC2-203ENST00000519587 BTNL2Q9UIR0 455 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
SDC2-203ENST00000519587 A0A1W2PRB8 838 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 OR2W5A6NFC9 320 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 TGFBR3LH3BV60 316 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 PEX12O00623 359 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 IFI6P09912 130 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 TNNI3P19429 210 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 NT5EP21589 574 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 PRDX6P30041 224 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 DGKQP52824 942 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 HSPB3Q12988 150 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 STX5Q13190 355 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
SDC2-203ENST00000519587 MLC1Q15049 377 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 MAPKAPK3Q16644 382 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 SFT2D3Q587I9 215 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 COQ5Q5HYK3 327 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 BROXQ5VW32 411 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 LANCL3Q6ZV70 420 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 CPEB2Q7Z5Q1 589 aaKnown RBP13.23□□□□□ -0.29
SDC2-203ENST00000519587 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 FUNDC1Q8IVP5 155 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 TRIML2Q8N7C3 387 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 ZSCAN1Q8NBB4 408 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 DNAJB8Q8NHS0 232 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
SDC2-203ENST00000519587 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 RIT1Q92963 219 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 UCN3Q969E3 161 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 VPS33AQ96AX1 596 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
SDC2-203ENST00000519587 CCDC115Q96NT0 180 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 LPAR4Q99677 370 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 LEF1Q9UJU2 399 aaPredicted RBP13.23□□□□□ -0.29
SDC2-203ENST00000519587 NDUFAF1Q9Y375 327 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 LOC400499M0QZD8 3231 aa13.23□□□□□ -0.29
SDC2-203ENST00000519587 LOC102723996A0A087X1L8 192 aa13.22□□□□□ -0.29
SDC2-203ENST00000519587 A0A1W2PP18 115 aa13.22□□□□□ -0.29
SDC2-203ENST00000519587 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
SDC2-203ENST00000519587 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
SDC2-203ENST00000519587 ZNF891A8MT65 544 aaPredicted RBP13.22□□□□□ -0.29
SDC2-203ENST00000519587 C17orf105B2RV13 164 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms