RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.33■□□□□ 0.36
FAM49B-208ENST00000518344 SENP1Q9P0U3 644 aa17.33■□□□□ 0.36
FAM49B-208ENST00000518344 CES1P1Q9UKY3 287 aa17.33■□□□□ 0.36
FAM49B-208ENST00000518344 PSME2Q9UL46 239 aa17.33■□□□□ 0.36
FAM49B-208ENST00000518344 RELNP78509 3460 aa17.33■□□□□ 0.36
FAM49B-208ENST00000518344 SERTM1A2A2V5 107 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 A8MVJ9 347 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 ERAL1O75616 437 aaKnown RBP17.32■□□□□ 0.36
FAM49B-208ENST00000518344 IGKV3-11P04433 115 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 CPMP14384 443 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 PORP16435 677 aaPredicted RBP17.32■□□□□ 0.36
FAM49B-208ENST00000518344 NT5EP21589 574 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 GALNSP34059 522 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 SRSF1Q07955 248 aaKnown RBP eCLIP17.32■□□□□ 0.36
FAM49B-208ENST00000518344 SPRED3Q2MJR0 410 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 SLC48A1Q6P1K1 146 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 IL20RBQ6UXL0 311 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 RNF111Q6ZNA4 994 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 FAM98AQ8NCA5 519 aaKnown RBP17.32■□□□□ 0.36
FAM49B-208ENST00000518344 NR4A3Q92570 626 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 KLHL29Q96CT2 875 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 ZIM3Q96PE6 472 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 RASL10BQ96S79 203 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 SLX1AQ9BQ83 275 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 EBPLQ9BY08 206 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 HPF1Q9NWY4 346 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 DLGAP4Q9Y2H0 992 aa17.32■□□□□ 0.36
FAM49B-208ENST00000518344 UBR5O95071 2799 aaPredicted RBP17.31■□□□□ 0.36
FAM49B-208ENST00000518344 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 AZIN1O14977 448 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 CTIFO43310 598 aaKnown RBP17.31■□□□□ 0.36
FAM49B-208ENST00000518344 NME2P1O60361 137 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 OR6B1O95007 311 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 AGFG2O95081 481 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 IL3P08700 152 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 NME2P22392 152 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 MST1P26927 711 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 TIA1P31483 386 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■■■□ 24.6
FAM49B-208ENST00000518344 FEN1P39748 380 aaKnown RBP17.31■□□□□ 0.36
FAM49B-208ENST00000518344 SOX3P41225 446 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 C6orf163Q5TEZ5 329 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 ZNF324BQ6AW86 544 aaPredicted RBP17.31■□□□□ 0.36
FAM49B-208ENST00000518344 FAM180BQ6P0A1 224 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 SLC29A4Q7RTT9 530 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 MDGA2Q7Z553 956 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 GALNT12Q8IXK2 581 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 C9orf40Q8IXQ3 194 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 CDC26Q8NHZ8 85 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 C16orf78Q8WTQ4 265 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 GAL3ST4Q96RP7 486 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 TRMOQ9BU70 441 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 CXorf21Q9HAI6 301 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 TIMMDC1Q9NPL8 285 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 RRAGDQ9NQL2 400 aaPredicted RBP17.31■□□□□ 0.36
FAM49B-208ENST00000518344 HEY2Q9UBP5 337 aa17.31■□□□□ 0.36
FAM49B-208ENST00000518344 TYROBPO43914 113 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 NPHS1O60500 1241 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 CHRNGP07510 517 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 ANXA4P09525 319 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-208ENST00000518344 CT62P0C5K7 136 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 CSNK2A2P19784 350 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-208ENST00000518344 SSTR4P31391 388 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 ALDH6A1Q02252 535 aaKnown RBP17.3■□□□□ 0.36
FAM49B-208ENST00000518344 ZCCHC23Q6ZST2 131 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 TRIM46Q7Z4K8 759 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 CPSF7Q8N684 471 aaKnown RBP17.3■□□□□ 0.36
FAM49B-208ENST00000518344 NUBPLQ8TB37 319 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 PFDN4Q9NQP4 134 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 SEC14L3Q9UDX4 400 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 OSGIN2Q9Y236 505 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 KLF13Q9Y2Y9 288 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-208ENST00000518344 ZNF780BQ9Y6R6 833 aa17.3■□□□□ 0.36
FAM49B-208ENST00000518344 CLEC18AA5D8T8 446 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 SLC28A1O00337 649 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 SEMA7AO75326 666 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 ERLIN1O75477 346 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 UNC5CO95185 931 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 CHEK2O96017 543 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 DRD2P14416 443 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 PTGER1P34995 402 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 TDGF1P3P51864 188 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 SLC37A1P57057 533 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 KCNK10P57789 538 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 HEPACAMQ14CZ8 416 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 PIGGQ5H8A4 983 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 ARL13AQ5H913 290 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-208ENST00000518344 CLEC18BQ6UXF7 455 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 GFRALQ6UXV0 394 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 EXOC3L1Q86VI1 746 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 SULF2Q8IWU5 870 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 GPALPP1Q8IXQ4 340 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 CLEC18CQ8NCF0 446 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 FRMD6Q96NE9 622 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 BRINP2Q9C0B6 783 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 TSPAN10Q9H1Z9 355 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-208ENST00000518344 EML4Q9HC35 981 aaKnown RBP17.29■□□□□ 0.36
FAM49B-208ENST00000518344 UTS2RQ9UKP6 389 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 POLR3HQ9Y535 204 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-208ENST00000518344 PTGDR2Q9Y5Y4 395 aa17.29■□□□□ 0.36
FAM49B-208ENST00000518344 SHANK1Q9Y566 2161 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms