RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GALNSP34059 522 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SDC2P34741 201 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 LTBRP36941 435 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPR3P46089 330 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FMO5P49326 533 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLUD2P49448 558 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FHITP49789 147 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 XKP51811 444 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GMFBP60983 142 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ISL1P61371 349 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 LSM3P62310 102 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SORDQ00796 357 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MC2RQ01718 297 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CYP24A1Q07973 514 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAP4K2Q12851 820 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 DGCR6Q14129 220 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARHGEF7Q14155 803 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GK2Q14410 553 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 OPCMLQ14982 345 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 LARS2Q15031 903 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 P2RY14Q15391 338 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 KYAT1Q16773 422 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF284Q2VY69 593 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 VPS26BQ4G0F5 336 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 KRTCAP3Q53RY4 240 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLRA4Q5JXX5 417 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC35D3Q5M8T2 416 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 N4BP2L1Q5TBK1 243 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF470Q6ECI4 717 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST2H2AA3Q6FI13 130 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLYATQ6IB77 296 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 EIF5AL1Q6IS14 154 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC25A24Q6NUK1 477 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 AADACL2Q6P093 401 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C1orf94Q6P1W5 598 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 DEGS2Q6QHC5 323 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM107Q6UX40 140 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM131AQ6UXB0 335 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 DLEU7Q6UYE1 221 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CHST15Q7LFX5 561 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC16A13Q7RTY0 426 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC46A3Q7Z3Q1 461 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FGD2Q7Z6J4 655 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SERINC5Q86VE9 423 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM131BQ86XD5 332 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PPP1R3BQ86XI6 285 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 KIAA0319LQ8IZA0 1049 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ADGRF3Q8IZF5 1079 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM132CQ8N3T6 1108 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRR18Q8N4B5 295 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C10orf53Q8N6V4 93 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLDN22Q8N7P3 220 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C15orf54Q8N8G6 183 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 NETO2Q8NC67 525 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 THAP6Q8TBB0 222 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TNFRSF14Q92956 283 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C3orf49Q96BT1 292 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAB3CQ96E17 227 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PEX11GQ96HA9 241 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM169Q96HH4 297 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRIG1Q96JA1 1093 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HBEGFQ99075 208 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSNAXQ99598 290 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CRB3Q9BUF7 120 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MECRQ9BV79 373 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL22Q9GZX6 179 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PIF1Q9H611 641 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 RNF122Q9H9V4 155 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SMURF1Q9HCE7 757 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C6orf50Q9HD87 102 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 C14orf105Q9NVL8 296 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 NLE1Q9NVX2 485 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM120CQ9NX05 1096 aaKnown RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CALML5Q9NZT1 146 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PAK5Q9P286 719 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEC14L3Q9UDX4 400 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR12D3Q9UGF7 316 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAGEL2Q9UJ55 1249 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FBXL7Q9UJT9 491 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 POMT2Q9UKY4 750 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC9A8Q9Y2E8 581 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ASB1Q9Y576 335 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TEX264Q9Y6I9 313 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAF1P21675 1872 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 TANC1Q9C0D5 1861 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SIPA1L1O43166 1804 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 RGPD1P0DJD0 1748 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 USP54Q70EL1 1684 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRRC37A3O60309 1634 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRP6O75581 1613 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ATRNL1Q5VV63 1379 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A1W2PPC1 479 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRORSD1PA6NEY8 169 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLTPD2A6NH11 291 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM159BA6NKW6 160 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 WASH3PC4AMC7 463 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C5orf58C9J3I9 102 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms