RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 USP6NLQ92738 828 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 THOC1Q96FV9 657 aaKnown RBP-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 DACH2Q96NX9 599 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SMIM14Q96QK8 99 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 ELOVL4Q9GZR5 314 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 NMUR1Q9HB89 426 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SH3GLB2Q9NR46 395 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SRP68Q9UHB9 627 aaKnown RBP-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 NRBP1Q9UHY1 535 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 E2F8A0AVK6 867 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF850A8MQ14 1090 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 A8MVM7 634 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 G3V3Y1 287 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLC17A2O00624 439 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 OGG1O15527 345 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 USO1O60763 962 aaKnown RBP-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 HIST1H2ABP04908 130 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 HRES1P13985 223 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 CBR1P16152 277 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 GJA1P17302 382 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 TCN2P20062 427 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 HIST1H2ADP20671 130 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 GSTO1P78417 241 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 ENPEPQ07075 957 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 GSTA3Q16772 222 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 ODF2Q5BJF6 829 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR2B11Q5JQS5 317 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 TANGO2Q6ICL3 276 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 COX15Q7KZN9 410 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 HIST3H2AQ7L7L0 130 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR2C3Q8N628 320 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 Q8N976 141 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR4K1Q8NGD4 311 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 RNASE11Q8TAA1 199 aaKnown RBP-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 NUDCD1Q96RS6 583 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 SORT1Q99523 831 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 GPR61Q9BZJ8 451 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 IFI27L2Q9H2X8 130 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 TMEM245Q9H330 911 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 Q9H8V8 135 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 LY9Q9HBG7 655 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 AMACRQ9UHK6 382 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 SIGLEC9Q9Y336 463 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 RRP7AQ9Y3A4 280 aaKnown RBP-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 BDP1A6H8Y1 2624 aa-1.76□□□□□ -2.69
RNU6-539P-201ENST00000516665 WNK2Q9Y3S1 2297 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 HSPG2P98160 4391 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 SCN4AP35499 1836 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 TRABD2BA6NFA1 517 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 GAGE10A6NGK3 116 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF860A6NHJ4 632 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 LYPLA1O75608 230 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 SRP72O76094 671 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 KLHL2O95198 593 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PGK1P00558 417 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PDGFBP01127 241 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ABCB4P21439 1286 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PDIA3P30101 505 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PPP2R1BP30154 601 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 CPOXP36551 454 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 EFNB2P52799 333 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 MFAP2P55001 183 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 IFIT5Q13325 482 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 WDR25Q64LD2 544 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 FIGLAQ6QHK4 219 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 SPINT4Q6UDR6 99 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PRSS55Q6UWB4 352 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 SYTL1Q8IYJ3 562 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 RDH10Q8IZV5 341 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 NDUFAF2Q8N183 169 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 FAM86B1Q8N7N1 296 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ATG16L2Q8NAA4 619 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PAPD5Q8NDF8 572 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR4C15Q8NGM1 316 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 TFB1MQ8WVM0 346 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 TRAPPC12Q8WVT3 735 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 NEIL2Q969S2 332 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 SDCCAG3Q96C92 435 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 CDHR1Q96JP9 859 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 FAM71F1Q96KD3 344 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 PSMD1Q99460 953 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF416Q9BWM5 594 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF717Q9BY31 904 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 INTS2Q9H0H0 1204 aaKnown RBP-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 HRH4Q9H3N8 390 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 DNAJC18Q9H819 358 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 IL1RL2Q9HB29 575 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ITM2CQ9NQX7 267 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 CLIC5Q9NZA1 410 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 CD274Q9NZQ7 290 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 ONECUT1Q9UBC0 465 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 WDR83OSQ9Y284 106 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 GRIP1Q9Y3R0 1128 aa-1.77□□□□□ -2.69
RNU6-539P-201ENST00000516665 IGLV10-54A0A075B6I4 117 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 TMEM221A6NGB7 291 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 LIPT2A6NK58 231 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 TCP10L2B9ZVM9 353 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 LAD1O00515 517 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 MED24O75448 989 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLC25A12O75746 678 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms