RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CLCF1Q9UBD9 225 aa9.55□□□□□ -0.88
CLDND1-231ENST00000515620 REXO2Q9Y3B8 237 aaKnown RBP9.55□□□□□ -0.88
CLDND1-231ENST00000515620 KCNE2Q9Y6J6 123 aa9.55□□□□□ -0.88
CLDND1-231ENST00000515620 IKBKGQ9Y6K9 419 aa9.55□□□□□ -0.88
CLDND1-231ENST00000515620 ABCA1O95477 2261 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 A0A1W2PNV4 684 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 A8MV72 311 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 TP53I11O14683 189 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 GNB5O14775 395 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 MSTNO14793 375 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 DYRK3O43781 588 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 FGF17O60258 216 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 SNX4O95219 450 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 TBX6O95947 436 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ACTL6AO96019 429 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 GCKP35557 465 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 UGT2B10P36537 528 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 STT3AP46977 705 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 PGGT1BP53609 377 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 IL2P60568 153 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 HERVK_113P63132 956 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ERVK-8P63133 956 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 GAB1Q13480 694 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ADPRMQ3LIE5 342 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 C4orf22Q6V702 233 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 DGAT2L6Q6ZPD8 337 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 VN1R5Q7Z5H4 357 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 KIAA1328Q86T90 577 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 GRAMD2AQ8IUY3 354 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 FAM83FQ8NEG4 500 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 CALML6Q8TD86 181 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 UCN3Q969E3 161 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ZBED6CLQ96FA7 236 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 HES6Q96HZ4 224 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ART5Q96L15 291 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 MAPKAP1Q9BPZ7 522 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 FAM167BQ9BTA0 163 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 G6PC3Q9BUM1 346 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ERVK-6Q9BXR3 956 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 AMBRA1Q9C0C7 1298 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 WWTR1Q9GZV5 400 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 LYRM4Q9HD34 91 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ERVK-19Q9WJR5 959 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 EPN1Q9Y6I3 576 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 NINQ8N4C6 2090 aa9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ANK3Q12955 4377 aaKnown RBP9.54□□□□□ -0.88
CLDND1-231ENST00000515620 ROS1P08922 2347 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 IQANK1A0A1B0GTG1 560 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ANKDD1BA6NHY2 528 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 H2AFYO75367 372 aaKnown RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 CLEC3AO75596 197 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ENO2P09104 434 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 C1GALT1C1LP0DN25 315 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 POU2F1P14859 743 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 CPN1P15169 458 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 HPDP32754 393 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 VPS41P49754 854 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 SARNPP82979 210 aaKnown RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 PLIN5Q00G26 463 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 GPS1Q13098 491 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 EBPQ15125 230 aaKnown RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 KBTBD12Q3ZCT8 623 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 HSP90AA5PQ58FG0 334 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ARMC3Q5W041 872 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 VWA1Q6PCB0 445 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 SBSNQ6UWP8 590 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ZNF793Q6ZN11 406 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 RNF111Q6ZNA4 994 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ZNF704Q6ZNC4 412 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 SLCO4C1Q6ZQN7 724 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 BTLAQ7Z6A9 289 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ADGRE4PQ86SQ3 457 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 CAND1Q86VP6 1230 aaKnown RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 LMNTD2Q8IXW0 634 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 TAGAPQ8N103 731 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 CNEP1R1Q8N9A8 125 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 SPPL2AQ8TCT8 520 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 F2RL3Q96RI0 385 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 ANGPTL4Q9BY76 406 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 OPN3Q9H1Y3 402 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 IARS2Q9NSE4 1012 aaKnown RBP9.53□□□□□ -0.88
CLDND1-231ENST00000515620 IKZF3Q9UKT9 509 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 MAPRE3Q9UPY8 281 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 SPACA6W5XKT8 324 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 CR1P17927 2039 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 MED12Q93074 2177 aa9.53□□□□□ -0.88
CLDND1-231ENST00000515620 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.52□□□□□ -0.89
CLDND1-231ENST00000515620 SDR42E2A6NKP2 422 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 CAPN14A8MX76 684 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 CDC7O00311 574 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 TMCC2O75069 709 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 WDR47O94967 919 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 NUDT7P0C024 238 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 GNAZP19086 355 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 CPN2P22792 545 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 GSTM2P28161 218 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 PTPN6P29350 595 aa9.52□□□□□ -0.89
CLDND1-231ENST00000515620 CASP3P42574 277 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms