RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TRMT10CQ7L0Y3 403 aaKnown RBP12.63□□□□□ -0.39
TCOF1-215ENST00000515516 GDF7Q7Z4P5 450 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 CNPY4Q8N129 248 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 FAM109AQ8N4B1 249 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 OR4F6Q8NGB9 312 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 OR4K14Q8NGD5 310 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 SELENOMQ8WWX9 145 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 SDCCAG3Q96C92 435 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 NSUN5Q96P11 429 aaKnown RBP12.63□□□□□ -0.39
TCOF1-215ENST00000515516 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 LDAHQ9H6V9 325 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 EXO5Q9H790 373 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 NFU1Q9UMS0 254 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 SLC12A4Q9UP95 1085 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ATP6AP2A0A1C7CYW4 349 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 WASHC1A8K0Z3 465 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 NPIPA2E9PIF3 369 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 NPIPA3F8WFD2 350 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 HRKO00198 91 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 BCKDKO14874 412 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 PGRMC2O15173 223 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ATP6AP2O75787 350 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 GLSO94925 669 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 CCL3P10147 92 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 TNFRSF8P28908 595 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 DNASE1L1P49184 302 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 MAPK12P53778 367 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 KCNJ2P63252 427 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 TRAF3Q13114 568 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 SLC10A1Q14973 349 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF791Q3KP31 576 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 GALNT12Q8IXK2 581 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 TMEM251Q8N6I4 163 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 FAM13CQ8NE31 585 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ASB5Q8WWX0 329 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 SPACA9Q96E40 222 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 MRPL1Q9BYD6 325 aaKnown RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 WWTR1Q9GZV5 400 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ZDHHC11Q9H8X9 412 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 ZBTB26Q9HCK0 441 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 CNIH4Q9P003 139 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 PSME2Q9UL46 239 aa12.62□□□□□ -0.39
TCOF1-215ENST00000515516 BOKQ9UMX3 212 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
TCOF1-215ENST00000515516 C2orf92A0A1B0GVN3 265 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 OR14I1A6ND48 311 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 A8MT66 165 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 ADAM10O14672 748 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TP53I11O14683 189 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-215ENST00000515516 SUPT7LO94864 414 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 PRF1P14222 555 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 NT5EP21589 574 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 PIGAP37287 484 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 MAGEA5P43359 124 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 MAN2A2P49641 1150 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 XKP51811 444 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 CDH13P55290 713 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 NRG3P56975 720 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 SLC37A1P57057 533 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 GXYLT1Q4G148 440 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TIFABQ6ZNK6 161 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 ACAD11Q709F0 780 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 LCA5Q86VQ0 697 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 METTL4Q8N3J2 472 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 OR5M3Q8NGP4 307 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TRPC4APQ8TEL6 797 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 PAQR8Q8TEZ7 354 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 RND1Q92730 232 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 JSRP1Q96MG2 331 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-215ENST00000515516 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 FAIM2Q9BWQ8 316 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 CXorf21Q9HAI6 301 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 BRF2Q9HAW0 419 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TEX10Q9NXF1 929 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-215ENST00000515516 TRPS1Q9UHF7 1281 aa12.61□□□□□ -0.39
TCOF1-215ENST00000515516 DIDO1Q9BTC0 2240 aaKnown RBP12.61□□□□□ -0.39
TCOF1-215ENST00000515516 C1orf226A1L170 272 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 RIPK2O43353 540 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 NADKO95544 446 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 PDYNP01213 254 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 KRT6AP02538 564 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 KRT6BP04259 564 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 FBXO45P0C2W1 286 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms