RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 POGLUT1Q8NBL1 392 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 FAM76AQ8TAV0 307 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 RIT1Q92963 219 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 TM4SF18Q96CE8 201 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 KCNA7Q96RP8 456 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 RASL10BQ96S79 203 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
CLCN3-210ENST00000515420 CXorf21Q9HAI6 301 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 KLHL1Q9NR64 748 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 HPF1Q9NWY4 346 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 CES1P1Q9UKY3 287 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 TIMM22Q9Y584 194 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 RSL1D1O76021 490 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 AGFG2O95081 481 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 ZIC2O95409 532 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 ATP1B1P05026 303 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 CPMP14384 443 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 CHN1P15882 459 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 PORP16435 677 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 TIA1P31483 386 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■■■□□ 17.1
CLCN3-210ENST00000515420 SERPINB5P36952 375 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 XKP51811 444 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 FOXA1P55317 472 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 SLC37A1P57057 533 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 FUT7Q11130 342 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 MAPKAPK3Q16644 382 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 EIF2S3LQ2VIR3 472 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 KRT71Q3SY84 523 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 KRTCAP3Q53RY4 240 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 C6orf163Q5TEZ5 329 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 OPN5Q6U736 354 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 RNF111Q6ZNA4 994 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 DGAT2L6Q6ZPD8 337 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 SLC29A4Q7RTT9 530 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 C9orf40Q8IXQ3 194 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF321PQ8N8H1 164 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 GOLM1Q8NBJ4 401 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 TCP10LQ8TDR4 215 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 SREK1Q8WXA9 508 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 ASB15Q8WXK1 588 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 PPWD1Q96BP3 646 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 FAM111AQ96PZ2 611 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 CNPPD1Q9BV87 410 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 HES7Q9BYE0 225 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 TIMMDC1Q9NPL8 285 aa11.85□□□□□ -0.51
CLCN3-210ENST00000515420 RRAGDQ9NQL2 400 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 WBP11Q9Y2W2 641 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 FLNBO75369 2602 aaKnown RBP11.85□□□□□ -0.51
CLCN3-210ENST00000515420 GNG14A0A1W2PPG7 69 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 WASHC1A8K0Z3 465 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 WWP2O00308 870 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 TYROBPO43914 113 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 PCDH7O60245 1069 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 NPHS1O60500 1241 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 CRCPO75575 148 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 STSP08842 583 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 NEFHP12036 1026 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
CLCN3-210ENST00000515420 PRPH2P23942 346 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
CLCN3-210ENST00000515420 SOX3P41225 446 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 ERVK-8P63133 956 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 RAE1P78406 368 aaKnown RBP11.84□□□□□ -0.51
CLCN3-210ENST00000515420 HMGCS1Q01581 520 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF844Q08AG5 666 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF267Q14586 743 aaPredicted RBP11.84□□□□□ -0.51
CLCN3-210ENST00000515420 HEPACAMQ14CZ8 416 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 IMPG1Q17R60 797 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 PIGGQ5H8A4 983 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 OR7G1Q8NGA0 311 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 SLC22A8Q8TCC7 542 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 APIPQ96GX9 242 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 SGCZQ96LD1 299 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 EHD3Q9NZN3 535 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 SLC17A7Q9P2U7 560 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 ERVK-11Q9UQG0 969 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 ERVK-19Q9WJR5 959 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 SLC5A6Q9Y289 635 aa11.84□□□□□ -0.51
CLCN3-210ENST00000515420 HRKO00198 91 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 AZIN1O14977 448 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 RGS16O15492 202 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 OR6B1O95007 311 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 CHEK2O96017 543 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 CLPSP04118 112 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 FGF4P08620 206 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF24P17028 368 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 MST1P26927 711 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ALDH3A1P30838 453 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 PMP22Q01453 160 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms