RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 BEST3Q8N1M1 668 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 HORMAD2Q8N7B1 307 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 OR1N1Q8NGS0 311 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 HAS2Q92819 552 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 C11orf24Q96F05 449 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 SENP5Q96HI0 755 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 PPP3R2Q96LZ3 170 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 UTP23Q9BRU9 249 aaKnown RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 RNF32Q9H0A6 362 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 TUBB1Q9H4B7 451 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 MIEF1Q9NQG6 463 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 PLA2G3Q9NZ20 509 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 MAP10Q9P2G4 905 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 UTS2RQ9UKP6 389 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 ENTPD4Q9Y227 616 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 WBP11Q9Y2W2 641 aaKnown RBP9.52□□□□□ -0.88
SSBP2-219ENST00000515395 TMED5Q9Y3A6 229 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 CCL27Q9Y4X3 112 aa9.52□□□□□ -0.88
SSBP2-219ENST00000515395 RP1L1Q8IWN7 2480 aaPredicted RBP9.52□□□□□ -0.89
SSBP2-219ENST00000515395 TRAV17A0A0B4J275 112 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 OR5H15A6NDH6 313 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 GABRR3A8MPY1 467 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 CDK2AP1O14519 115 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 LSM1O15116 133 aaKnown RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 DDAH2O95865 285 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 WDPCPO95876 746 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 F10P00742 488 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 NT5EP21589 574 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ARRB2P32121 409 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 FEN1P39748 380 aaKnown RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 RPL14P50914 215 aaKnown RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 GPR143P51810 404 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ERVK-8P63133 956 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 OC90Q02509 493 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 BST1Q10588 318 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ZNF169Q14929 603 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 SPRED3Q2MJR0 410 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 PLEKHN1Q494U1 663 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 RNF111Q6ZNA4 994 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 Q6ZS92 163 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 Q6ZSR9 355 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 IKBIPQ70UQ0 350 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 GALNT12Q8IXK2 581 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 MMP21Q8N119 569 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ZNF781Q8N8C0 355 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 OR2T11Q8NH01 316 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 RAB3IL1Q8TBN0 382 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ZNF721Q8TF20 911 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 EXOSC8Q96B26 276 aaKnown RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 TUBGCP3Q96CW5 907 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 C19orf60Q96EN9 201 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 FBXL20Q96IG2 436 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 SH3GL2Q99962 352 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 MANSC1Q9H8J5 431 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ZNF395Q9H8N7 513 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-219ENST00000515395 MYNNQ9NPC7 610 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 THAP1Q9NVV9 213 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 EHD3Q9NZN3 535 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 LUZP4Q9P127 313 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 HEY2Q9UBP5 337 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 CES1P1Q9UKY3 287 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ERVK-19Q9WJR5 959 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
SSBP2-219ENST00000515395 ATP6AP2A0A1C7CYW4 349 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 PEX11AO75192 247 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 ATP6AP2O75787 350 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 DDCP20711 480 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 MPIP34949 423 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 ASMTP46597 345 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 TNFSF10P50591 281 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 MLF1P58340 268 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 RNF4P78317 190 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 MAD2L1Q13257 205 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 KIAA0040Q15053 153 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 PDCD2Q16342 344 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 RFTN2Q52LD8 501 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 TTMPQ5BVD1 217 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 XKR7Q5GH72 579 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 CES4AQ5XG92 561 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 DGAT2L6Q6ZPD8 337 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 SLC29A4Q7RTT9 530 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 LRRC25Q8N386 305 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 TMEM156Q8N614 296 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 CATSPER1Q8NEC5 780 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 OR8K3Q8NH51 312 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 DYDC1Q8WWB3 177 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 BBS4Q96RK4 519 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 BRINP2Q9C0B6 783 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 EPN3Q9H201 632 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 CXorf21Q9HAI6 301 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 SLC35C2Q9NQQ7 365 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 ANKRD10Q9NXR5 420 aa9.5□□□□□ -0.89
SSBP2-219ENST00000515395 ZNF223Q9UK11 482 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 YARS2Q9Y2Z4 477 aaKnown RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 GCN1Q92616 2671 aaKnown RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 SMG1Q96Q15 3661 aaKnown RBP9.5□□□□□ -0.89
SSBP2-219ENST00000515395 UQCRHLA0A096LP55 91 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms