RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	ASB8	Q9H765	288 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	ELL3	Q9HB65	397 aa	Predicted RBP	2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	PDF	Q9HBH1	243 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	TUFT1	Q9NNX1	390 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402		Q9UF83	564 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	ERVK-19	Q9WJR5	959 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	RNF24	Q9Y225	148 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402	POMT1	Q9Y6A1	747 aa		2.95	□□□□□ -1.94
MATR3-223	ENST00000514402		A0A087X0K7	114 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	KLF18	A0A0U1RQI7	1052 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402		E7ENQ6	273 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ST8SIA3	O43173	380 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	SLC4A1	P02730	911 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	C8orf89	P0DMQ9	161 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	P4HA1	P13674	534 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	OR1D2	P34982	312 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	IST1	P53990	364 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	SLC34A1	Q06495	639 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	NFE2L1	Q14494	772 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	SLMAP	Q14BN4	828 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	EMC2	Q15006	297 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ZNF674	Q2M3X9	581 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CNPY1	Q3B7I2	92 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	C14orf28	Q4W4Y0	310 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CCDC158	Q5M9N0	1113 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	LRRC38	Q5VT99	294 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CNST	Q6PJW8	725 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	KLHL7	Q8IXQ5	586 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ZNF491	Q8N8L2	437 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	NHLRC2	Q8NBF2	726 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	SPC24	Q8NBT2	197 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	UXS1	Q8NBZ7	420 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CCDC197	Q8NCU1	140 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	KRT35	Q92764	455 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CCDC43	Q96MW1	224 aa	Known RBP	2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	S1PR3	Q99500	378 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	CITED2	Q99967	270 aa	Predicted RBP	2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	THUMPD3	Q9BV44	507 aa	Known RBP	2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ABCG4	Q9H172	646 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ZDHHC6	Q9H6R6	413 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	SRD5A3	Q9H8P0	318 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	COPS7B	Q9H9Q2	264 aa	Predicted RBP	2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	ZNF275	Q9NSD4	429 aa	Predicted RBP	2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	TMEM161A	Q9NX61	479 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402	DNAJB9	Q9UBS3	223 aa		2.94	□□□□□ -1.94
MATR3-223	ENST00000514402		A0A0U1RQK1	487 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ZNF320	A2RRD8	509 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	TSC22D2	O75157	780 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	DUSP11	O75319	330 aa	Known RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CS	O75390	466 aa	Known RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CALML3	P27482	149 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	GJB2	P29033	226 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CHRNA3	P32297	505 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	MDH2	P40926	338 aa	Known RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ID1	P41134	155 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CD86	P42081	329 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	HSD17B7	P56937	341 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	RPL27	P61353	136 aa	Known RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	PTK6	Q13882	451 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	SPHAR	Q15513	63 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	PARP10	Q53GL7	1025 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	WDR25	Q64LD2	544 aa	Predicted RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	C11orf88	Q6PI97	169 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402		Q6ZVH6	145 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	NAXD	Q8IW45	347 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	KLHDC8A	Q8IYD2	350 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	SIX6OS1	Q8N1H7	587 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ATAD1	Q8NBU5	361 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	SPATA18	Q8TC71	538 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	PTP4A1	Q93096	173 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	MR1	Q95460	341 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ULK4	Q96C45	1275 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CABS1	Q96KC9	395 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	LINC00167	Q96N53	147 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	SPAG8	Q99932	426 aa	Predicted RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	C19orf43	Q9BQ61	176 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	TTYH2	Q9BSA4	534 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ACAT2	Q9BWD1	397 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	NUSAP1	Q9BXS6	441 aa	Known RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	WWP1	Q9H0M0	922 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	MMADHC	Q9H3L0	296 aa	Predicted RBP	2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	CUEDC2	Q9H467	287 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	MLX	Q9UH92	298 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	FBXL5	Q9UKA1	691 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	ACE	P12821	1306 aa		2.93	□□□□□ -1.94
MATR3-223	ENST00000514402	IGHV3OR16-12	A0A075B7B8	117 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	TNFSF11	O14788	317 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	CPLX1	O14810	134 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	PSMA7	O14818	248 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	HDAC3	O15379	428 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	HMMR	O75330	724 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	DES	P17661	470 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	HLA-DPA1	P20036	260 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	ZBTB25	P24278	435 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	TCF7	P36402	384 aa	Predicted RBP	2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	SLC25A1	P53007	311 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	SLC12A3	P55017	1021 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	IL1RL1	Q01638	556 aa		2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	YWHAH	Q04917	246 aa	Predicted RBP	2.92	□□□□□ -1.94
MATR3-223	ENST00000514402	HSPA14	Q0VDF9	509 aa		2.92	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms