RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MROH9Q5TGP6 573 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 FBXW8Q8N3Y1 598 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 FAM13CQ8NE31 585 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 OR10G3Q8NGC4 313 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 RHEBL1Q8TAI7 183 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 ZNF559Q9BR84 538 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 CENPKQ9BS16 269 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 EXO5Q9H790 373 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 ZNF703Q9H7S9 590 aaPredicted RBP11.24□□□□□ -0.61
SNHG4-208ENST00000514110 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 ZFP64Q9NPA5 681 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 PCDHGA11Q9Y5H2 935 aa11.24□□□□□ -0.61
SNHG4-208ENST00000514110 CHCHD2Q9Y6H1 151 aaPredicted RBP11.24□□□□□ -0.61
SNHG4-208ENST00000514110 INTS1Q8N201 2190 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 H0YIV9 168 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 OR10H2O60403 315 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 SIX3O95343 332 aaPredicted RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 AIFM1O95831 613 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GBAP04062 536 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GFAPP14136 432 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 PIK3CGP48736 1102 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 NEK2P51955 445 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 ARFIP1P53367 373 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 ALDH18A1P54886 795 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 KCNJ2P63252 427 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 MYBPHQ13203 477 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GTF2H2Q13888 395 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 ACAP2Q15057 778 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 EBPQ15125 230 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 PCBP2Q15366 365 aaKnown RBP eCLIP11.23□□□□□ -0.614e-7■□□□□ 8.4
SNHG4-208ENST00000514110 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 FAM83EQ2M2I3 478 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GTF2H2CQ6P1K8 395 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 CYP20A1Q6UW02 462 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 RNF111Q6ZNA4 994 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 SLC29A4Q7RTT9 530 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GOLGA7Q7Z5G4 137 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 TMEM200AQ86VY9 491 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 LRRC25Q8N386 305 aaPredicted RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 WDR20Q8TBZ3 569 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 NRGNQ92686 78 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 RIT1Q92963 219 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 GPR78Q96P69 363 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 SLC6A15Q9H2J7 730 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 DDX31Q9H8H2 851 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 IPPKQ9H8X2 491 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 LYARQ9NX58 379 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 CNIH4Q9P003 139 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
SNHG4-208ENST00000514110 CNOT11Q9UKZ1 510 aaKnown RBP11.23□□□□□ -0.61
SNHG4-208ENST00000514110 A0A096LPK6 155 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 OR6C76A6NM76 312 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 PGRMC2O15173 223 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 UGDHO60701 494 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 KLHL2O95198 593 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 SLC35E2P0CK97 266 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 NR2F6P10588 404 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 SERPINB3P29508 390 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 TRPC1P48995 793 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 PHEXP78562 749 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 TBL3Q12788 808 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CUL3Q13618 768 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 SNTB1Q13884 538 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 NTRK2Q16620 822 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 UBAP2Q5T6F2 1119 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CES4AQ5XG92 561 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 TMEM64Q6YI46 380 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CCDC91Q7Z6B0 441 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 DND1Q8IYX4 353 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 L3MBTL4Q8NA19 623 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 REPS1Q96D71 796 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 JSRP1Q96MG2 331 aaPredicted RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CDK15Q96Q40 435 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 PELOQ9BRX2 385 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 ACKR4Q9NPB9 350 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 CPSF2Q9P2I0 782 aaKnown RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 BOKQ9UMX3 212 aaPredicted RBP11.22□□□□□ -0.61
SNHG4-208ENST00000514110 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
SNHG4-208ENST00000514110 C2orf92A0A1B0GVN3 265 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 ESYT3A0FGR9 886 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 CCDC189A1A4V9 331 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 KDM4EB2RXH2 506 aaPredicted RBP11.21□□□□□ -0.61
SNHG4-208ENST00000514110 FOXE1O00358 373 aaPredicted RBP11.21□□□□□ -0.61
SNHG4-208ENST00000514110 OR7A17O14581 309 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 TRIM3O75382 744 aaPredicted RBP11.21□□□□□ -0.61
SNHG4-208ENST00000514110 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.61
SNHG4-208ENST00000514110 CT62P0C5K7 136 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 GABRA1P14867 456 aa11.21□□□□□ -0.61
SNHG4-208ENST00000514110 SSTR4P31391 388 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms