RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 C9orf16Q9BUW7 83 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 RSPO3Q9BXY4 272 aaPredicted RBP12.09□□□□□ -0.47
PVT1-203ENST00000513868 PDE7BQ9NP56 450 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 IL1RAPQ9NPH3 570 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
PVT1-203ENST00000513868 GIMAP4Q9NUV9 329 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 TMEM9Q9P0T7 183 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 U3KQA8 63 aa12.09□□□□□ -0.47
PVT1-203ENST00000513868 DMDP11532 3685 aa12.08□□□□□ -0.47
PVT1-203ENST00000513868 KMT2EQ8IZD2 1858 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 M0QX08 132 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 DENRO43583 198 aaKnown RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 RDH16O75452 317 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 RASAL1O95294 804 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 CST1P01037 141 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 TLX1P31314 330 aaPredicted RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 MLLT3P42568 568 aaPredicted RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 SELENOWP63302 87 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 GPLD1P80108 840 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 SHC2P98077 582 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 VLDLRP98155 873 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ZDHHC21Q8IVQ6 265 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 CARFQ8N187 725 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 Q8N9G6 341 aaPredicted RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 OR4C6Q8NH72 309 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 AHCYL2Q96HN2 611 aaKnown RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 C7orf34Q96L11 122 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 DOHHQ9BU89 302 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 VCXQ9H320 206 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ANKRA2Q9H9E1 313 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 CAPN10Q9HC96 672 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ANKHQ9HCJ1 492 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ENAMQ9NRM1 1142 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 NTMQ9P121 344 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 MN1Q10571 1320 aaPredicted RBP12.08□□□□□ -0.48
PVT1-203ENST00000513868 NUP210LQ5VU65 1888 aa12.08□□□□□ -0.48
PVT1-203ENST00000513868 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 A0A0A6YYC8 382 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 FITM1A5D6W6 292 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 I3L1I5 382 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 EMC8O43402 210 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 CHST10O43529 356 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 DUX1O43812 170 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 FGF17O60258 216 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 LDB3O75112 727 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 FHP07954 510 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 CPMP14384 443 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MATN1P21941 496 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MC3RP41968 323 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 PPM1FP49593 454 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 IST1P53990 364 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 RAB38P57729 211 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 FAM53BQ14153 422 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 ELOAQ14241 798 aaKnown RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 INAVAQ3KP66 663 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 AMZ1Q400G9 498 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 NHSL2Q5HYW2 709 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 REEP3Q6NUK4 255 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 TSEN54Q7Z6J9 526 aaKnown RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 PLXDC1Q8IUK5 500 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 SLC30A8Q8IWU4 369 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 LRRC25Q8N386 305 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 OR5D16Q8NGK9 328 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 KAT2AQ92830 837 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 GIMAP5Q96F15 307 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MAGED4Q96JG8 741 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 SLC35G5Q96KT7 338 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 DUSP23Q9BVJ7 150 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 SPRTNQ9H040 489 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 OR51I1Q9H343 314 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 SOHLH2Q9NX45 425 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 MAGED1Q9Y5V3 778 aaPredicted RBP12.07□□□□□ -0.48
PVT1-203ENST00000513868 AP4B1Q9Y6B7 739 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 SPEGQ15772 3267 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 RALGAPA1Q6GYQ0 2036 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
PVT1-203ENST00000513868 HYKKA2RU49 373 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 PRAMEF25A6NGN4 478 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 EI24O14681 340 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 SUV39H1O43463 412 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 OPN1SWP03999 348 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 CFIP05156 583 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 OR12D1P0DN82 309 aa12.06□□□□□ -0.48
PVT1-203ENST00000513868 ZNF23P17027 643 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms