RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 EBPQ15125 230 aaKnown RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 TRIP13Q15645 432 aaPredicted RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 WIPI1Q5MNZ9 446 aaPredicted RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 EEF1A1P5Q5VTE0 462 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ADNP2Q6IQ32 1131 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ZNF793Q6ZN11 406 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 SLC29A4Q7RTT9 530 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 KRT78Q8N1N4 520 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 MCUQ8NE86 351 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 SPPL2AQ8TCT8 520 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 WNT2BQ93097 391 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 PPWD1Q96BP3 646 aaKnown RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 INTS12Q96CB8 462 aaKnown RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 PDLIM5Q96HC4 596 aaKnown RBP9.97□□□□□ -0.81
DDX41-216ENST00000513562 DGAT2Q96PD7 388 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 KCNC2Q96PR1 638 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 GAL3ST4Q96RP7 486 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 MAPKAP1Q9BPZ7 522 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ANGPTL4Q9BY76 406 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ROGDIQ9GZN7 287 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ACBD3Q9H3P7 528 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 CLCF1Q9UBD9 225 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
DDX41-216ENST00000513562 ANKDD1BA6NHY2 528 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 TP53I11O14683 189 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 MSTNO14793 375 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 WDR47O94967 919 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 SCELO95171 688 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 AHSGP02765 367 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.82
DDX41-216ENST00000513562 PTPN6P29350 595 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 CCKARP32238 428 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 SLC6A12P48065 614 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 HNMTP50135 292 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 FBXW4P57775 412 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 CDKL1Q00532 357 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 PLIN5Q00G26 463 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 GPS1Q13098 491 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 GAB1Q13480 694 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 TOMM20Q15388 145 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 SPRED3Q2MJR0 410 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 PLEKHM3Q6ZWE6 761 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 UBE3DQ7Z6J8 389 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 GALNT7Q86SF2 657 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 PACS2Q86VP3 889 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 HIPK1Q86Z02 1210 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 CNTN4Q8IWV2 1026 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 OR4N5Q8IXE1 308 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 GCNT2Q8N0V5 402 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 TAGAPQ8N103 731 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 BBOF1Q8ND07 529 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 RNF214Q8ND24 703 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 FAM83FQ8NEG4 500 aaPredicted RBP9.96□□□□□ -0.82
DDX41-216ENST00000513562 TMEM41AQ96HV5 264 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 SIGLEC10Q96LC7 697 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 F2RL3Q96RI0 385 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 PIGQQ9BRB3 760 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 MED18Q9BUE0 208 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 G6PC3Q9BUM1 346 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 TEX10Q9NXF1 929 aaPredicted RBP9.96□□□□□ -0.82
DDX41-216ENST00000513562 WIF1Q9Y5W5 379 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 SPACA6W5XKT8 324 aa9.96□□□□□ -0.82
DDX41-216ENST00000513562 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 IQANK1A0A1B0GTG1 560 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 A0A1W2PNV4 684 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 OR6C76A6NM76 312 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 CAPN14A8MX76 684 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 H0Y3Z8 333 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 CDC7O00311 574 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 SNPHO15079 494 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 PHF1O43189 567 aaPredicted RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 TMCC2O75069 709 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 CLPSP04118 112 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 HIST1H1TP22492 207 aaPredicted RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 CASP3P42574 277 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 GDF5P43026 501 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 SLC37A1P57057 533 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 HERVK_113P63132 956 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 ERVK-8P63133 956 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 BIKQ13323 160 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 CRYMQ14894 314 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 TIGD3Q6B0B8 471 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 SCIMPQ6UWF3 145 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 PLXDC2Q6UX71 529 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 TMEM64Q6YI46 380 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 RNF111Q6ZNA4 994 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 YRDCQ86U90 279 aaKnown RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 ST13P4Q8IZP2 240 aaPredicted RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 TXLNBQ8N3L3 684 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 RNF10Q8N5U6 811 aaKnown RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 ACOT4Q8N9L9 421 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 MAPK1IP1LQ8NDC0 245 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 TMEM171Q8WVE6 324 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 UCN3Q969E3 161 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 RBM18Q96H35 190 aaKnown RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 EGFL8Q99944 293 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 TBCDQ9BTW9 1192 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 ERVK-6Q9BXR3 956 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms