RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ELMOD3Q96FG2 381 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 S100A16Q96FQ6 103 aaKnown RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 SLC39A13Q96H72 371 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF583Q96ND8 569 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 DOK1Q99704 481 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 NUBP2Q9Y5Y2 271 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 J3QLW9 94 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 WWP2O00308 870 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PTGESO14684 152 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PI15O43692 258 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ADAP00813 363 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 MT-ND5P03915 603 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 HOXD8P13378 290 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF19P17023 458 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 M6PRP20645 277 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PRDX3P30048 256 aaKnown RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 MAN2A2P49641 1150 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 P2RX3P56373 397 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 FAM189BP81408 668 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 FAM205BPQ63HN1 556 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 SLC27A4Q6P1M0 643 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 BAIAP2L2Q6UXY1 529 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 RTL4Q6ZR62 310 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ADGRG2Q8IZP9 1017 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 DNAJC22Q8N4W6 341 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 GPR62Q9BZJ7 368 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 OR51I1Q9H343 314 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ZCCHC3Q9NUD5 404 aaKnown RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 CKLFQ9UBR5 152 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 A0A075B6Q4 140 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 LOC105369274A0A096LPK9 316 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 OR2A25A4D2G3 310 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 MEN1O00255 615 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TIMP1P01033 207 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PROS1P07225 676 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 SLC35G6P0C7Q6 338 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ADORA3P0DMS8 318 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ALAS2P22557 587 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 LIPAP38571 399 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TRNP1Q6NT89 227 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 SLC25A24Q6NUK1 477 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 C3P1Q6ZMU1 363 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 IQCHQ86VS3 1027 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 OR4N4Q8N0Y3 316 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF615Q8N8J6 731 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 CIDECQ96AQ7 238 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TOX2Q96NM4 488 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 BRINP2Q9C0B6 783 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 NANSQ9NR45 359 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 RBFOX1Q9NWB1 397 aaKnown RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 IL36AQ9UHA7 158 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PSORS1C1Q9UIG5 152 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 USP54Q70EL1 1684 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 CITO14578 2027 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 CD8B2A6NJW9 211 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 SAP18O00422 153 aaKnown RBP10.75□□□□□ -0.69
TCOF1-211ENST00000513346 CD8BP10966 210 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 TYRP14679 529 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 HRH2P25021 359 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ARRB2P32121 409 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 NUDT1P36639 197 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ACTR1BP42025 376 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 HTR3AP46098 478 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ACTR1AP61163 376 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 RANBP3LQ86VV4 465 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ZFP41Q8N8Y5 198 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF548Q8NEK5 533 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-211ENST00000513346 OR4K1Q8NGD4 311 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 HMGB4Q8WW32 186 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 NUS1Q96E22 293 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 FYTTD1Q96QD9 318 aaKnown RBP10.75□□□□□ -0.69
TCOF1-211ENST00000513346 INPP5KQ9BT40 448 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 EFCAB11Q9BUY7 163 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 EXO5Q9H790 373 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 TREX1Q9NSU2 369 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 C14orf105Q9NVL8 296 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 TMEM248Q9NWD8 314 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ZDHHC3Q9NYG2 299 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 OARD1Q9Y530 152 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 PCDHGB7Q9Y5F8 929 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 A0A1W2PRQ8 180 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 C5orf51A6NDU8 294 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 RHPN2P1A8MT19 583 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 SLC25A12O75746 678 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 TPPPO94811 219 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 PRR5P85299 388 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 VEZF1Q14119 521 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ALG11Q2TAA5 492 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 LY6G5CQ5SRR4 150 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 PNPLA1Q8N8W4 532 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 ADAMTS19Q8TE59 1207 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 UQCC2Q9BRT2 126 aa10.75□□□□□ -0.69
TCOF1-211ENST00000513346 RIOK2Q9BVS4 552 aaKnown RBP10.75□□□□□ -0.69
TCOF1-211ENST00000513346 WDR26Q9H7D7 661 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms