RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 NTRK2Q16620 822 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 FAM45BPQ6NSW5 357 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 ZNF474Q6S9Z5 364 aaPredicted RBP10.18□□□□□ -0.78
RNF4-218ENST00000513284 TMEM64Q6YI46 380 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 VN1R5Q7Z5H4 357 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 GALNT7Q86SF2 657 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 GCNT2Q8N0V5 402 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 FAM13CQ8NE31 585 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 FAM45AQ8TCE6 357 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 ABTB1Q969K4 478 aaPredicted RBP10.18□□□□□ -0.78
RNF4-218ENST00000513284 PPWD1Q96BP3 646 aaKnown RBP10.18□□□□□ -0.78
RNF4-218ENST00000513284 FBXL8Q96CD0 374 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 FAR2Q96K12 515 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 SIGLEC10Q96LC7 697 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 RUNDC3BQ96NL0 473 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 NDNQ99608 321 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 PELI2Q9HAT8 420 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 PPANQ9NQ55 473 aaKnown RBP10.18□□□□□ -0.78
RNF4-218ENST00000513284 PRDM7Q9NQW5 492 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 ASIC3Q9UHC3 531 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
RNF4-218ENST00000513284 HAX1O00165 279 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 KLF4O43474 513 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 B3GALT2O43825 422 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 FAM157CP0CG43 387 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 CERS1P27544 350 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 GABRB3P28472 473 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 CCKARP32238 428 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 HPDP32754 393 aaPredicted RBP10.17□□□□□ -0.78
RNF4-218ENST00000513284 PLA2G16P53816 162 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 STXBP1P61764 594 aaKnown RBP10.17□□□□□ -0.78
RNF4-218ENST00000513284 STX4Q12846 297 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 CLEC12BQ2HXU8 276 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 ADPRMQ3LIE5 342 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 CHRFAM7AQ494W8 412 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 ADNP2Q6IQ32 1131 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 TTC27Q6P3X3 843 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 ZNF550Q7Z398 422 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 UBE3DQ7Z6J8 389 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 YRDCQ86U90 279 aaKnown RBP10.17□□□□□ -0.78
RNF4-218ENST00000513284 THOC6Q86W42 341 aaKnown RBP10.17□□□□□ -0.78
RNF4-218ENST00000513284 OR4N5Q8IXE1 308 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 SLC22A8Q8TCC7 542 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 WNT2BQ93097 391 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 STARD4Q96DR4 205 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 CERS2Q96G23 380 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 AIF1LQ9BQI0 150 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 ANGPTL4Q9BY76 406 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 PIGMQ9H3S5 423 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 FETUBQ9UGM5 382 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 SLC22A14Q9Y267 594 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 DTX4Q9Y2E6 619 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 C15orf41Q9Y2V0 281 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 KCNE2Q9Y6J6 123 aa10.17□□□□□ -0.78
RNF4-218ENST00000513284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.16□□□□□ -0.782e-7■■■■■ 29.5
RNF4-218ENST00000513284 A0A088AWK7 358 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 LRRC14BA6NHZ5 514 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 MSTNO14793 375 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 GUCA1CO95843 209 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 TGM6O95932 706 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 CLPSP04118 112 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 THBDP07204 575 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 CYP4B1P13584 511 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ZNF10P21506 573 aaPredicted RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 SERPINB3P29508 390 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 RPL21P46778 160 aaKnown RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 CDKN2DP55273 166 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 FBXW4P57775 412 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 IGLV3-21P80748 117 aaPredicted RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 RUNX1T1Q06455 604 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ILF2Q12905 390 aaKnown RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 EFTUD2Q15029 972 aaKnown RBP eCLIP10.16□□□□□ -0.788e-8■■■□□ 16.7
RNF4-218ENST00000513284 RNASEH2BQ5TBB1 312 aaKnown RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 DNM1P46Q6ZS02 220 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 SH2D5Q6ZV89 423 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 TMPRSS11BQ86T26 416 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 CNTN4Q8IWV2 1026 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 PDIK1LQ8N165 341 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 AGGF1Q8N302 714 aaeCLIP10.16□□□□□ -0.78
RNF4-218ENST00000513284 TTLQ8NG68 377 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 OR2L5Q8NG80 312 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ACTRT1Q8TDG2 376 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 DIO2Q92813 273 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 CTHRC1Q96CG8 243 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ZNF597Q96LX8 424 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 RILPQ96NA2 401 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ZFP3Q96NJ6 502 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 SERINC2Q96SA4 455 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 MAPKAP1Q9BPZ7 522 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 ZNF226Q9NYT6 803 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 CLCF1Q9UBD9 225 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 PACSIN3Q9UKS6 424 aa10.16□□□□□ -0.78
RNF4-218ENST00000513284 MRPS33Q9Y291 106 aaKnown RBP10.16□□□□□ -0.78
RNF4-218ENST00000513284 A0A1W2PNV4 684 aa10.15□□□□□ -0.78
RNF4-218ENST00000513284 A8MV72 311 aaPredicted RBP10.15□□□□□ -0.78
RNF4-218ENST00000513284 OVOL3O00110 214 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms