RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KRT6AP02538 564 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 KRT6BP04259 564 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 KRT4P19013 534 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 KRT6CP48668 564 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 NAGLUP54802 743 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 DUSP2Q05923 314 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 PAGE2Q7Z2X7 111 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 CCDC63Q8NA47 563 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 PSD4Q8NDX1 1056 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 AGAP11Q8TF27 550 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 RIT1Q92963 219 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 EBPLQ9BY08 206 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 VPS29Q9UBQ0 182 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 ADAM29Q9UKF5 820 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 DNAJC13O75165 2243 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 PCNX1Q96RV3 2341 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 DOPEY1Q5JWR5 2465 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 FAM166BA8MTA8 275 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 CCL21O00585 134 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 COPEO14579 308 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 TFECO14948 347 aaPredicted RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 ASNA1O43681 348 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 DYRK3O43781 588 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 HS6ST1O60243 411 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 SLC19A2O60779 497 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 CDH16O75309 829 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 ERAL1O75616 437 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 LRATO95237 230 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 NADKO95544 446 aaPredicted RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 CCL3P10147 92 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 ALDH9A1P49189 494 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 PKNOX1P55347 436 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 SLC37A1P57057 533 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 BTKQ06187 659 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 CSTF3Q12996 717 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 C3AR1Q16581 482 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 C10orf62Q5T681 223 aaPredicted RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 TMEM64Q6YI46 380 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 C3P1Q6ZMU1 363 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 RNF111Q6ZNA4 994 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 FGD2Q7Z6J4 655 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 CHERPQ8IWX8 916 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 OR5L2Q8NGL0 311 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 AENQ8WTP8 325 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 CHTF18Q8WVB6 975 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 ZBTB9Q96C00 473 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 TM4SF18Q96CE8 201 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 APIPQ96GX9 242 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 PELOQ9BRX2 385 aaKnown RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 GRID1Q9ULK0 1009 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 PCDHA9Q9Y5H5 950 aa12.29□□□□□ -0.44
RNF4-215ENST00000511843 NCOA6Q14686 2063 aaPredicted RBP12.29□□□□□ -0.44
RNF4-215ENST00000511843 CDK2AP1O14519 115 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 CDC40O60508 579 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■□□□□ 8.2
RNF4-215ENST00000511843 ULK1O75385 1050 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 PDE9AO76083 593 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 SLU7O95391 586 aaKnown RBP12.28□□□□□ -0.44
RNF4-215ENST00000511843 ESRRBO95718 433 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
RNF4-215ENST00000511843 CPMP14384 443 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 CPA3P15088 417 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 NT5EP21589 574 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 SERPINB3P29508 390 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 CRHR1P34998 444 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 CCT5P48643 541 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 XKP51811 444 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 PER3P56645 1201 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 RBPJQ06330 500 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 EBPQ15125 230 aaKnown RBP12.28□□□□□ -0.44
RNF4-215ENST00000511843 LTB4RQ15722 352 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 CCDC153Q494R4 210 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 PIGGQ5H8A4 983 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 SLC48A1Q6P1K1 146 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 FAM111BQ6SJ93 734 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 RTL4Q6ZR62 310 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 FRMD7Q6ZUT3 714 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 SLC29A4Q7RTT9 530 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 MAMDC2Q7Z304 686 aaPredicted RBP12.28□□□□□ -0.44
RNF4-215ENST00000511843 GALNT12Q8IXK2 581 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 ZFP62Q8NB50 900 aaPredicted RBP12.28□□□□□ -0.44
RNF4-215ENST00000511843 SIMC1Q8NDZ2 872 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 ADCY4Q8NFM4 1077 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 OR52N2Q8NGI0 321 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.28□□□□□ -0.44
RNF4-215ENST00000511843 RELTQ969Z4 430 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 MAGED4Q96JG8 741 aa12.28□□□□□ -0.44
RNF4-215ENST00000511843 ART5Q96L15 291 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms