RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 IKBKGQ9Y6K9 419 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 ANKDD1BA6NHY2 528 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 WASHC1A8K0Z3 465 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 H2AFYO75367 372 aaKnown RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 PRKRAO75569 313 aaKnown RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 LOXP28300 417 aaPredicted RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 SERPINB3P29508 390 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 CPA2P48052 419 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 HERVK_113P63132 956 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ERVK-8P63133 956 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 FAM27E3Q08E93 113 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF460Q14592 562 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ADGRE4PQ86SQ3 457 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 IGDCC3Q8IVU1 814 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 GCNT2Q8N0V5 402 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF441Q8N8Z8 693 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 IGFBPL1Q8WX77 278 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ABTB1Q969K4 478 aaPredicted RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 INTS12Q96CB8 462 aaKnown RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 RHBDF1Q96CC6 855 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 FBXL20Q96IG2 436 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 MARK4Q96L34 752 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 DGAT2Q96PD7 388 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 EGFL8Q99944 293 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 SFXN3Q9BWM7 321 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 SORBS1Q9BX66 1292 aaKnown RBP17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ERVK-6Q9BXR3 956 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 ERVK-19Q9WJR5 959 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 VWA7Q9Y334 891 aa17.33■□□□□ 0.36
HMGCS1-206ENST00000511774 A8MXE2 369 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 CASKO14936 926 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 SH3BGRLO75368 114 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF37AP17032 561 aaPredicted RBP17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 GSTM2P28161 218 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 PTH2RP49190 550 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 SLC37A1P57057 533 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 CDKL1Q00532 357 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 RCN2Q14257 317 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 MSS51Q4VC12 460 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 YRDCQ86U90 279 aaKnown RBP17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 SPPL2AQ8TCT8 520 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 ZPLD1Q8TCW7 415 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 PIK3IP1Q96FE7 263 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 TMEM79Q9BSE2 394 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 ANGPTL4Q9BY76 406 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 GSX2Q9BZM3 304 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 KLHL28Q9NXS3 571 aa17.32■□□□□ 0.36
HMGCS1-206ENST00000511774 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 CES2O00748 559 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 SNPHO15079 494 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 TAPBPO15533 448 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 TNFSF13O75888 250 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 RCBTB2O95199 551 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 C8BP07358 591 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 COX7A2P14406 83 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 PGAM1P18669 254 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 CCKARP32238 428 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 CXCR5P32302 372 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 KCNC1P48547 511 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 SF3B4Q15427 424 aaKnown RBP eCLIP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 TSNQ15631 228 aaKnown RBP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 TEDDM1Q5T9Z0 273 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 C22orf34Q6ZV56 151 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 DND1Q8IYX4 353 aaKnown RBP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 KRT78Q8N1N4 520 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 MAPK1IP1LQ8NDC0 245 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 FAM83FQ8NEG4 500 aaPredicted RBP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 ESAMQ96AP7 390 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 KCNC2Q96PR1 638 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 MS4A8Q9BY19 250 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 TEX10Q9NXF1 929 aaPredicted RBP17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 OARD1Q9Y530 152 aa17.31■□□□□ 0.36
HMGCS1-206ENST00000511774 GNB5O14775 395 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 SCELO95171 688 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 EPORP19235 508 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 HIST1H1TP22492 207 aaPredicted RBP17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 CPN2P22792 545 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 PTPN6P29350 595 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 CASP3P42574 277 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 NR1H2P55055 460 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 DOC2AQ14183 400 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF267Q14586 743 aaPredicted RBP17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 RPS6KA2Q15349 733 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 TOMM20Q15388 145 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 C18orf63Q68DL7 685 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 DESI1Q6ICB0 168 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 HMBOX1Q6NT76 420 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 GALNT7Q86SF2 657 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 CLCF1Q9UBD9 225 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 NDRG3Q9UGV2 375 aa17.3■□□□□ 0.36
HMGCS1-206ENST00000511774 A0A1W2PS29 197 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 NCF1BA6NI72 391 aaPredicted RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 NCF1CA8MVU1 366 aaPredicted RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 SAP18O00422 153 aaKnown RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 CYP4B1P13584 511 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 NCF1P14598 390 aaPredicted RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 FPR1P21462 350 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms