RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TRIM46Q7Z4K8 759 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 SULF2Q8IWU5 870 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 MMP21Q8N119 569 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 NUBPLQ8TB37 319 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 SREK1Q8WXA9 508 aaKnown RBP14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 RASL10BQ96S79 203 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 CXorf21Q9HAI6 301 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 HEY2Q9UBP5 337 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 MCM8Q9UJA3 840 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 ERRFI1Q9UJM3 462 aaPredicted RBP14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 MYO7BQ6PIF6 2116 aa14.96□□□□□ -0.01
PDLIM5-216ENST00000511767 ICE1Q9Y2F5 2266 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 CCDC151A5D8V7 595 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 DYRK3O43781 588 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 OR10H2O60403 315 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 SPAG7O75391 227 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 OR6B1O95007 311 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 AGFG2O95081 481 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 CLPSP04118 112 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 TUBBP07437 444 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 PORP16435 677 aaPredicted RBP14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 S1PR1P21453 382 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 SLC37A1P57057 533 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 ERVK-8P63133 956 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 BTKQ06187 659 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 MGAT2Q10469 447 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 FUT7Q11130 342 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 RNFT1Q5M7Z0 435 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 GALNT18Q6P9A2 607 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 IL20RBQ6UXL0 311 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 SRRM1Q8IYB3 904 aaKnown RBP14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 TCP10LQ8TDR4 215 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 TMEM125Q96AQ2 219 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 APOPT1Q96IL0 206 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 SLC17A7Q9P2U7 560 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 COPS7AQ9UBW8 275 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 PSME2Q9UL46 239 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 ERVK-19Q9WJR5 959 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 OSGIN2Q9Y236 505 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 CCL27Q9Y4X3 112 aa14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 SPTBN1Q01082 2364 aaKnown RBP14.95□□□□□ -0.02
PDLIM5-216ENST00000511767 DIDO1Q9BTC0 2240 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 CROCCQ5TZA2 2017 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 KLRC4-KLRK1H3BQV0 150 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 PEX1O43933 1283 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 FGF4P08620 206 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 CT62P0C5K7 136 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 CPMP14384 443 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ALDH3A1P30838 453 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SOX18P35713 384 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SOX3P41225 446 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ASPHQ12797 758 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 PCLAFQ15004 111 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 KRTCAP3Q53RY4 240 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 LYPD8Q6UX82 237 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SIAH3Q8IW03 269 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 C9orf40Q8IXQ3 194 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 GPALPP1Q8IXQ4 340 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 CYP4Z2PQ8N1L4 340 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF615Q8N8J6 731 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 C16orf78Q8WTQ4 265 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ASB15Q8WXK1 588 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ART5Q96L15 291 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF681Q96N22 645 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 FRMD6Q96NE9 622 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 FAM111AQ96PZ2 611 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SHCBP1LQ9BZQ2 653 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SEC14L3Q9UDX4 400 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 MID2Q9UJV3 735 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 ERVK-11Q9UQG0 969 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 SLC5A6Q9Y289 635 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 DLGAP4Q9Y2H0 992 aa14.94□□□□□ -0.02
PDLIM5-216ENST00000511767 GTF3C1Q12789 2109 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 ASNA1O43681 348 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 TYROBPO43914 113 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 UNC5CO95185 931 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 NADKO95544 446 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 STSP08842 583 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 RNF224P0DH78 156 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 UROSP10746 265 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 DRD2P14416 443 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 CSNK2A2P19784 350 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 FEN1P39748 380 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 KCNK10P57789 538 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 ALDH6A1Q02252 535 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF844Q08AG5 666 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 ACSM2AQ08AH3 577 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 MAP4K2Q12851 820 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 KIAA0040Q15053 153 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 ACSM2BQ68CK6 577 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 GFRALQ6UXV0 394 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 CPSF7Q8N684 471 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 SLC15A4Q8N697 577 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 C16orf52Q8NHV5 167 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 SGCZQ96LD1 299 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 CNPPD1Q9BV87 410 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 FAIM2Q9BWQ8 316 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms