RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TUFMP49411 452 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 YWHAHQ04917 246 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 RBPJQ06330 500 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CDKN3Q16667 212 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ZC2HC1CQ53FD0 456 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC35E4Q6ICL7 350 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CENPPQ6IPU0 288 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 GUSBP11Q6P575 273 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CORO6Q6QEF8 472 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CCDC186Q7Z3E2 898 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CENPVQ7Z7K6 275 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 TMEM150AQ86TG1 271 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 IQCKQ8N0W5 287 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 NKAIN3Q8N8D7 197 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 OR13J1Q8NGT2 312 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 FGFBP3Q8TAT2 258 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 FCAMRQ8WWV6 532 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 TM9SF4Q92544 642 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 VPS33AQ96AX1 596 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF524Q96C55 264 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CPB2Q96IY4 423 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SFXN2Q96NB2 322 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 PSD2Q9BQI7 771 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 NUP85Q9BW27 656 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 AP1M1Q9BXS5 423 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 LHX5Q9H2C1 402 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 BOLA2Q9H3K6 86 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ST6GALNAC4Q9H4F1 302 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 MINDY3Q9H8M7 445 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 GPN2Q9H9Y4 310 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SGK2Q9HBY8 427 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SERINC1Q9NRX5 453 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF701Q9NV72 531 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 COQ3Q9NZJ6 369 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 B3GAT1Q9P2W7 334 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 UXTQ9UBK9 157 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 LRWD1Q9UFC0 647 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC7A7Q9UM01 511 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 PADI2Q9Y2J8 665 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 COL27A1Q8IZC6 1860 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 PKDREJQ9NTG1 2253 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 BAZ2BQ9UIF8 2168 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 OBSL1O75147 1896 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 KNL1Q8NG31 2342 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 FAM170AA1A519 330 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 NEMP2A6NFY4 417 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 FAM72CH0Y354 149 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 GAPDHSO14556 408 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC22A2O15244 555 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 RNF113AO15541 343 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 PHF1O43189 567 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 DPM1O60762 260 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 RNASEH1O60930 286 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 CRLF1O75462 422 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 IGHV2-70P01814 119 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 PRSS1P07477 247 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ZFYP08048 801 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 INHBAP08476 426 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 RAB40ALP0C0E4 278 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 OR4Q2P0C623 313 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 OR52Z1P0C646 297 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ATF6P18850 670 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 TCN2P20062 427 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ACHEP22303 614 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 MPZP25189 248 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 MARCKSP29966 332 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF41P51814 821 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 LGALS3BPQ08380 585 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 OVGP1Q12889 678 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 GPR17Q13304 367 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ALDH1L2Q3SY69 923 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 TTC31Q49AM3 519 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 CEP55Q53EZ4 464 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 FAM72AQ5TYM5 149 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 PLA2G4FQ68DD2 849 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 FAM72DQ6L9T8 149 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 PRR27Q6MZM9 219 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF449Q6P9G9 518 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 CD300LGQ6UXG3 332 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 RBMS3Q6XE24 437 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 C16orf47Q6ZP98 133 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 NCCRP1Q6ZVX7 275 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 TMPRSS11BQ86T26 416 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF554Q86TJ5 538 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 TRPT1Q86TN4 253 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 FAM72BQ86X60 149 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ARHGAP24Q8N264 748 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC25A45Q8N413 288 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 STPG4Q8N801 248 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ATAD1Q8NBU5 361 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 ST6GALNAC3Q8NDV1 305 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 Q8NFD4 153 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 GRHL3Q8TE85 626 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 IRGQQ8WZA9 623 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 STARD8Q92502 1023 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 HSD17B8Q92506 261 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 NAT6Q93015 286 aa3.18□□□□□ -1.9
TOPBP1-208ENST00000511439 PNPLA2Q96AD5 504 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms