RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SAMD12Q8N8I0 201 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 OR1K1Q8NGR3 316 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 FBXO25Q8TCJ0 367 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 RASL10AQ92737 203 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 HIST1H2ACQ93077 130 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 GPR137Q96N19 417 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 TMEM237Q96Q45 408 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 SPAG8Q99932 426 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 SOSTQ9BQB4 213 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 XPO4Q9C0E2 1151 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ELL3Q9HB65 397 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 HPS4Q9NQG7 708 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 TAS2R16Q9NYV7 291 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 IL19Q9UHD0 177 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 RARRES3Q9UL19 164 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 CPQQ9Y646 472 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 FGD5Q6ZNL6 1462 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SNED1Q8TER0 1413 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SPAG9O60271 1321 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SALL1Q9NSC2 1324 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 A0A1B0GTH9 108 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ARHGAP42A6NI28 874 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC9B1P1A6NJY1 282 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ACOD1A6NK06 481 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SHISA9B4DS77 424 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 K7EQG2 157 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SH2D1BO14796 132 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 HTATSF1O43719 755 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR6B1O95007 311 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SYNGR4O95473 234 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 IGHV3-13P01766 116 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 GNSP15586 552 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ACADSP16219 412 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 CAPN2P17655 700 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 AHCYP23526 432 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 LMO2P25791 158 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SPRP35270 261 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ETV5P41161 510 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TNFRSF4P43489 277 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TKTL1P51854 596 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 NLRP11P59045 1033 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SSTP61278 116 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 RPS4XP62701 263 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 KLF5Q13887 457 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 POM121L1PQ3SYA9 428 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TCHHL1Q5QJ38 904 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 AGAP7PQ5VUJ5 663 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 LIPJQ5W064 366 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 EMBQ6PCB8 327 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 WDR88Q6ZMY6 472 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF841Q6ZN19 808 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TIPARPQ7Z3E1 657 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 NUFIP2Q7Z417 695 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 RPAINQ86UA6 219 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC25A42Q86VD7 318 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 MAPK1IP1LQ8NDC0 245 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 CHDHQ8NE62 594 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR52E1Q8NGJ3 308 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR4Q3Q8NH05 313 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 RDH11Q8TC12 318 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC13A3Q8WWT9 602 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 HSD17B14Q9BPX1 270 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 JPH2Q9BR39 696 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF577Q9BSK1 485 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 DCTN5Q9BTE1 182 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 RBM24Q9BX46 236 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 NACA2Q9H009 215 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ADNPQ9H2P0 1102 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TNMDQ9H2S6 317 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 DCTPP1Q9H773 170 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 HOMER3Q9NSC5 361 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SEC14L4Q9UDX3 406 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 TRIM10Q9UDY6 481 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 KLK13Q9UKR3 277 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 ENTPD4Q9Y227 616 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC9A8Q9Y2E8 581 aa2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 RPH3AQ9Y2J0 694 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-207ENST00000511409 AFF2P51816 1311 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CFAP73A6NFT4 308 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CFLARO15519 480 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 NME2P1O60361 137 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CRLF1O75462 422 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 FCER2P06734 321 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 PROS1P07225 676 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 HSD17B1P14061 328 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 FCARP24071 287 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 SFNP31947 248 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 HSPA1LP34931 641 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNF131P52739 623 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC12A3P55017 1021 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 NME3Q13232 169 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 PDK1Q15118 436 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CDC37Q16543 378 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CLPPQ16740 277 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM44Q2T9K0 475 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 UNC50Q53HI1 259 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR6B2Q6IFH4 312 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 PLBD1Q6P4A8 553 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CWC27Q6UX04 472 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms