RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SLC16A5O15375 505 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 BUD23O43709 281 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 NARSO43776 548 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SLC5A2P31639 672 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 DRD3P35462 400 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 NUMBP49757 651 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ATXN3P54252 364 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SSTP61278 116 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 UFM1P61960 85 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CNTN1Q12860 1018 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RCN2Q14257 317 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 PTPRCAPQ14761 206 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 BCL2A1Q16548 175 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 BCL7AQ4VC05 210 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 DEPDC1Q5TB30 811 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 AGBL4Q5VU57 503 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 PTRHD1Q6GMV3 140 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CLEC9AQ6UXN8 241 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 FAM151BQ6UXP7 276 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TRIM69Q86WT6 500 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ARHGAP24Q8N264 748 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 HDDC3Q8N4P3 179 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 OR52M1Q8NGK5 317 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 OR5M3Q8NGP4 307 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CFAP61Q8NHU2 1237 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 STARD8Q92502 1023 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 GLYATL1Q969I3 302 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 AP2M1Q96CW1 435 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CIB1Q99828 191 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SPATA16Q9BXB7 569 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RAD21L1Q9H4I0 556 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 WDR26Q9H7D7 661 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 LIN7CQ9NUP9 197 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 NKX1-2Q9UD57 310 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RNF24Q9Y225 148 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RUVBL2Q9Y230 463 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RAXQ9Y2V3 346 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 MYO10Q9HD67 2058 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 PIKFYVEQ9Y2I7 2098 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 A0A1W2PQF6 199 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 C9orf172C9J069 976 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ENTPD5O75356 428 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ATP1B2P14415 290 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF37AP17032 561 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 MSH3P20585 1137 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 HOXA6P31267 233 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RPS9P46781 194 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CCNG1P51959 295 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CDH15P55291 814 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CSRP2Q16527 193 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF628Q5EBL2 1059 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TECRLQ5HYJ1 363 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CTSL3PQ5NE16 218 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 PIANPQ8IYJ0 282 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 CENPLQ8N0S6 344 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 FSTL5Q8N475 847 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF781Q8N8C0 355 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ENDOVQ8N8Q3 282 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TMEM105Q8N8V8 129 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 Q8NA96 180 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TXNDC5Q8NBS9 432 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 RBM15BQ8NDT2 890 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 PRSS33Q8NF86 280 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 STAG3L4Q8TBR4 150 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TBC1D15Q8TC07 691 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 LINC00615Q96LM1 132 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 GPR78Q96P69 363 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SECISBP2Q96T21 854 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 ACOX2Q99424 681 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 OLFM1Q99784 485 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 GATA5Q9BWX5 397 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 GPR61Q9BZJ8 451 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 COQ10BQ9H8M1 238 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 COG4Q9H9E3 785 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 TBC1D17Q9HA65 648 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 MRPL15Q9P015 296 aaKnown RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 LOC105369274A0A096LPK9 316 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 TRAV34A0A0B4J273 112 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 C10orf142B7Z368 130 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 E9PBE3 544 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 MID1O15344 667 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 CCNT2O60583 730 aaKnown RBP6.74□□□□□ -1.33
CLCN3-206ENST00000507875 ADAM23O75077 832 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 SMIM24O75264 130 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF217O75362 1048 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 GASTP01350 101 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 IL1AP01583 271 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 CHRNB1P11230 501 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 GNAZP19086 355 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 FMO4P31512 558 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 PSMB10P40306 273 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 BUD31P41223 144 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF41P51814 821 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-206ENST00000507875 RAP1GDS1P52306 607 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 PGGT1BP53609 377 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 CDKN2DP55273 166 aa6.74□□□□□ -1.33
CLCN3-206ENST00000507875 ITGA1P56199 1179 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms