RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 HAO1Q9UJM8 370 aa18.51■□□□□ 0.55
SNX25-204ENST00000506896 PTGDR2Q9Y5Y4 395 aa18.51■□□□□ 0.55
SNX25-204ENST00000506896 WASHC1A8K0Z3 465 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 LSM1O15116 133 aaKnown RBP18.5■□□□□ 0.55
SNX25-204ENST00000506896 CPMP14384 443 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 CSNK2A2P19784 350 aaPredicted RBP18.5■□□□□ 0.55
SNX25-204ENST00000506896 ALDH9A1P49189 494 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 RPL14P50914 215 aaKnown RBP18.5■□□□□ 0.55
SNX25-204ENST00000506896 XKP51811 444 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 ARG2P78540 354 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 BST1Q10588 318 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 TTMPQ5BVD1 217 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 XKR7Q5GH72 579 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 Q6ZS92 163 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 RPS19BP1Q86WX3 136 aaKnown RBP18.5■□□□□ 0.55
SNX25-204ENST00000506896 CRLF3Q8IUI8 442 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 AMER2Q8N7J2 671 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 OR2T11Q8NH01 316 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 SLC2A12Q8TD20 617 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 RIT1Q92963 219 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 UCN3Q969E3 161 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 KLHL29Q96CT2 875 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 FBXL20Q96IG2 436 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 FCRL1Q96LA6 429 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 OR8D2Q9GZM6 311 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 MYNNQ9NPC7 610 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.5■□□□□ 0.551e-7■□□□□ 10.9
SNX25-204ENST00000506896 POLR3HQ9Y535 204 aaPredicted RBP18.5■□□□□ 0.55
SNX25-204ENST00000506896 ZNF780BQ9Y6R6 833 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 CPAMD8Q8IZJ3 1885 aa18.5■□□□□ 0.55
SNX25-204ENST00000506896 ZFAND5O76080 213 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 DDAH2O95865 285 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 PORP16435 677 aaPredicted RBP18.49■□□□□ 0.55
SNX25-204ENST00000506896 TLR1Q15399 786 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 ATP6AP1LQ52LC2 224 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 HSDL2Q6YN16 418 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 ZNF781Q8N8C0 355 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 OR8K3Q8NH51 312 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 CPT1CQ8TCG5 803 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 PPWD1Q96BP3 646 aaKnown RBP18.49■□□□□ 0.55
SNX25-204ENST00000506896 C19orf60Q96EN9 201 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 SENP5Q96HI0 755 aaPredicted RBP18.49■□□□□ 0.55
SNX25-204ENST00000506896 SORT1Q99523 831 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 C20orf27Q9GZN8 174 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 SLAMF7Q9NQ25 335 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 THAP1Q9NVV9 213 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 HEY2Q9UBP5 337 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 UTS2RQ9UKP6 389 aa18.49■□□□□ 0.55
SNX25-204ENST00000506896 FCHO1O14526 889 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 SKAP2O75563 359 aaPredicted RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 ERAL1O75616 437 aaKnown RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 WDPCPO95876 746 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 DDCP20711 480 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 MAPK1P28482 360 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 MLF1P58340 268 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 RPL38P63173 70 aaKnown RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 INPP5JQ15735 1006 aaPredicted RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 RFTN2Q52LD8 501 aaPredicted RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 FCRLBQ6BAA4 426 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 MMP21Q8N119 569 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 OR5L2Q8NGL0 311 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNX25-204ENST00000506896 ZNF721Q8TF20 911 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 CDCP1Q9H5V8 836 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 MANSC1Q9H8J5 431 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 ZNF395Q9H8N7 513 aaPredicted RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 CXorf21Q9HAI6 301 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 MIEF1Q9NQG6 463 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 GIMAP4Q9NUV9 329 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 ZNF223Q9UK11 482 aaPredicted RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 SETXQ7Z333 2677 aaKnown RBP18.48■□□□□ 0.55
SNX25-204ENST00000506896 COL12A1Q99715 3063 aa18.48■□□□□ 0.55
SNX25-204ENST00000506896 OR5H15A6NDH6 313 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 KLF11O14901 512 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 SNNO75324 88 aaPredicted RBP18.47■□□□□ 0.55
SNX25-204ENST00000506896 SASH3O75995 380 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 IGKV3-11P04433 115 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 ATP1B1P05026 303 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 TNFSF10P50591 281 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 C2orf80Q0P641 193 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 GALNTL6Q49A17 601 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 FAM71E1Q6IPT2 247 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 GALNT12Q8IXK2 581 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 BEST3Q8N1M1 668 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 CDC26Q8NHZ8 85 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 SUN3Q8TAQ9 357 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 NPAS2Q99743 824 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 UTP23Q9BRU9 249 aaKnown RBP18.47■□□□□ 0.55
SNX25-204ENST00000506896 CNPPD1Q9BV87 410 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 RYDENQ9NUL5 291 aaKnown RBP18.47■□□□□ 0.55
SNX25-204ENST00000506896 LUZP4Q9P127 313 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 ENTPD4Q9Y227 616 aa18.47■□□□□ 0.55
SNX25-204ENST00000506896 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 TRAV17A0A0B4J275 112 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 GABRR3A8MPY1 467 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 NT5EP21589 574 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 ASMTP46597 345 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 ERVK-8P63133 956 aa18.46■□□□□ 0.55
SNX25-204ENST00000506896 RNF4P78317 190 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms