RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PHF10Q8WUB8 498 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 MTFMTQ96DP5 389 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 TMEM237Q96Q45 408 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 RHOXF2Q9BQY4 288 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ERVK-6Q9BXR3 956 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ZDHHC11Q9H8X9 412 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 WDR41Q9HAD4 459 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 BRF2Q9HAW0 419 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 FARSBQ9NSD9 589 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 TRPS1Q9UHF7 1281 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SH3BGRL2Q9UJC5 107 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ERVK-11Q9UQG0 969 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 MEMO1Q9Y316 297 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 DNAJC13O75165 2243 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CACNA1CQ13936 2221 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 IQANK1A0A1B0GTG1 560 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1B0GTH9 108 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 OR6C76A6NM76 312 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 E9PLN8 166 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 DYRK3O43781 588 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 OR4F21O95013 312 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PDYNP01213 254 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 KLK1P06870 262 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 GSTA1P08263 222 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 CCL3P10147 92 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ABOP16442 354 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TSPAN8P19075 237 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TAC1P20366 129 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 CNR1P21554 472 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ATP5F1P24539 256 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ARL1P40616 181 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 NR0B1P51843 470 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ERVK-8P63133 956 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 CLCQ05315 142 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 FUT7Q11130 342 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 FOXO1Q12778 655 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TBL3Q12788 808 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 IFT88Q13099 833 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF267Q14586 743 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 EBPQ15125 230 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 HYAL4Q2M3T9 481 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 NDUFAF5Q5TEU4 345 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TTC19Q6DKK2 380 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 XKRXQ6PP77 449 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 DNAJC14Q6Y2X3 702 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 RGS9BPQ6ZS82 235 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 SH2D5Q6ZV89 423 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PAGE2Q7Z2X7 111 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 COMMD6Q7Z4G1 85 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TICAM1Q8IUC6 712 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 OR52N2Q8NGI0 321 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM57AQ8TBR7 257 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PAQR8Q8TEZ7 354 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 SPACA9Q96E40 222 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 L3HYPDHQ96EM0 354 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF382Q96SR6 550 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 VKORC1Q9BQB6 163 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM173AQ9BQD7 235 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 TTTY12Q9BZ98 90 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 WWTR1Q9GZV5 400 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ELOVL6Q9H5J4 265 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 L2HGDHQ9H9P8 463 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 CXorf21Q9HAI6 301 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 AHSPQ9NZD4 102 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 CES1P1Q9UKY3 287 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 SNX6Q9UNH7 406 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 ERVK-19Q9WJR5 959 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
PDLIM5-209ENST00000506632 PRSS44E7EML9 344 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 G3V3Y1 287 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 ACOT7O00154 380 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 MANBAO00462 879 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PRRG2O14669 202 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 HNRNPRO43390 633 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 OR10H2O60403 315 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 IGHG3P01860 377 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 FBXO45P0C2W1 286 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CT62P0C5K7 136 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 ESRRAP11474 423 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 HSD3B1P14060 373 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 IMPDH1P20839 514 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 S1PR1P21453 382 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 HSD3B2P26439 372 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PIK3R1P27986 724 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 TNFRSF8P28908 595 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PTGS2P35354 604 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SOX18P35713 384 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PRKAA2P54646 552 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms