RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 CHCHD2Q9Y6H1 151 aaPredicted RBP8.42□□□□□ -1.06
PTPN20-216ENST00000506080 FREM3P0C091 2139 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 NINQ8N4C6 2090 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 SERTM1A2A2V5 107 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 SH3D21A4FU49 640 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 HRKO00198 91 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 RTCAO00442 366 aaKnown RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 FGF17O60258 216 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 ERN1O75460 977 aaKnown RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 CLEC3AO75596 197 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 C1QAP02745 245 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 TMIGD3P0DMS9 266 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 COX7A2P14406 83 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 PGAM1P18669 254 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 PTMSP20962 102 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 CXCR5P32302 372 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 OPRM1P35372 400 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 MSH2P43246 934 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 TBL3Q12788 808 aaKnown RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 DCST1Q5T197 706 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 BICRALQ6AI39 1079 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 ZNF793Q6ZN11 406 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 YTHDF3Q7Z739 585 aaKnown RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 KRT78Q8N1N4 520 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 C9orf106Q8NAJ2 232 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 PERPQ96FX8 193 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 ZNF597Q96LX8 424 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 DACH2Q96NX9 599 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 DGAT2Q96PD7 388 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 PRDM7Q9NQW5 492 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 GALNT8Q9NY28 637 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 CNIH4Q9P003 139 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 JKAMPQ9P055 326 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 EIF3LQ9Y262 564 aaKnown RBP8.41□□□□□ -1.06
PTPN20-216ENST00000506080 VWA7Q9Y334 891 aa8.41□□□□□ -1.06
PTPN20-216ENST00000506080 FBN1P35555 2871 aaKnown RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 MBD3L4A6NDZ8 208 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 MBD3L3A6NE82 208 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 NCF1BA6NI72 391 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 MBD3L5A6NJ08 208 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CD8B2A6NJW9 211 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 NCF1CA8MVU1 366 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CES2O00748 559 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CASKO14936 926 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SH3BGRLO75368 114 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 TRIM3O75382 744 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 IGKV3-11P04433 115 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 NCF1P14598 390 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 BMP7P18075 431 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CPN2P22792 545 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SERPINB3P29508 390 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 HPDP32754 393 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SOX18P35713 384 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 STT3AP46977 705 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CPA2P48052 419 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 FOXF2Q12947 444 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 TOMM20Q15388 145 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SF3B4Q15427 424 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 EIPR1Q53HC9 387 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 VASNQ6EMK4 673 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 TMEM64Q6YI46 380 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 CAPN12Q6ZSI9 719 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SYDE1Q6ZW31 735 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 UBE3DQ7Z6J8 389 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 LRRC75A-AS1Q8N1F1 130 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 SLC15A4Q8N697 577 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 NAT8LQ8N9F0 302 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 MBD3L2Q8NHZ7 208 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 FAM45AQ8TCE6 357 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 DIO2Q92813 273 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 WDYHV1Q96HA8 205 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 UGT2B28Q9BY64 529 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 NT5DC2Q9H857 520 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 LYRM4Q9HD34 91 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 PPANQ9NQ55 473 aaKnown RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 C6orf203Q9P0P8 240 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 TRPS1Q9UHF7 1281 aa8.4□□□□□ -1.06
PTPN20-216ENST00000506080 ZNF490Q9ULM2 529 aaPredicted RBP8.4□□□□□ -1.06
PTPN20-216ENST00000506080 IQANK1A0A1B0GTG1 560 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CLGNO14967 610 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 DYRK3O43781 588 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PRAMEF4O60810 478 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 IL18BPO95998 194 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ZNF37AP17032 561 aaPredicted RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ATP5A1P25705 553 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 GSTM2P28161 218 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SLCO1A2P46721 670 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 RPL21P46778 160 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SLC6A12P48065 614 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 KCNC1P48547 511 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 HNMTP50135 292 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 HERVK_113P63132 956 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ERVK-8P63133 956 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CDKL1Q00532 357 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms